Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:134798843-135218857

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Armcx2 X 134804145 to 134809221 5076 - protein coding gene armadillo repeat containing, X-linked 2
Tssr164157 X 134806649 to 134806681 32 - TSS region transcription start site region 164157
Tssr164158 X 134808984 to 134809002 18 - TSS region transcription start site region 164158
Gm7222 X 134828140 to 134829045 905 - pseudogene predicted gene 7222
Gm15018 X 134906002 to 134906622 620 - pseudogene predicted gene 15018
Del(XNxf2-Nxf3)1Jw X 134944526 to 136085255 1140729 chromosomal deletion deletion, Chr X, Jeremy Wang 1
Nxf2 X 134944526 to 134964754 20228 - protein coding gene nuclear RNA export factor 2
Cpgi22945 X 134963697 to 134964017 320 CpG island CpG island 22945
Tssr164159 X 134964695 to 134964726 31 - TSS region transcription start site region 164159
Tssr164160 X 134964742 to 134964767 25 - TSS region transcription start site region 164160
Zmat1 X 134971372 to 135009209 37837 - protein coding gene zinc finger, matrin type 1
Tssr164161 X 134973136 to 134973147 11 - TSS region transcription start site region 164161
Cpgi22946 X 135008759 to 135009378 619 CpG island CpG island 22946
Tssr162015 X 135008843 to 135008857 14 + TSS region transcription start site region 162015
Tssr164162 X 135009192 to 135009225 33 - TSS region transcription start site region 164162
Tssr164163 X 135009226 to 135009236 10 - TSS region transcription start site region 164163
3632454L22Rik X 135022734 to 135060336 37602 - lncRNA gene RIKEN cDNA 3632454L22 gene
Tssr164164 X 135025307 to 135025344 37 - TSS region transcription start site region 164164
Cpgi22947 X 135035876 to 135036180 304 CpG island CpG island 22947
Tssr164165 X 135036078 to 135036090 12 - TSS region transcription start site region 164165
Tssr164166 X 135036091 to 135036099 8 - TSS region transcription start site region 164166
Gm6207 X 135119960 to 135122983 3023 - pseudogene predicted gene 6207
Gm15020 X 135122878 to 135152596 29718 - unclassified non-coding RNA gene predicted gene 15020
Gm25868 X 135165848 to 135165961 113 + snoRNA gene predicted gene, 25868
Gm15023 X 135167624 to 135177632 10008 - protein coding gene predicted gene 15023
Tceal6 X 135208687 to 135210687 2000 - protein coding gene transcription elongation factor A (SII)-like 6
Tssr164167 X 135210605 to 135210612 7 - TSS region transcription start site region 164167
Tssr164168 X 135210621 to 135210630 9 - TSS region transcription start site region 164168
Tssr164169 X 135210640 to 135210661 21 - TSS region transcription start site region 164169
Tssr164170 X 135210672 to 135210700 28 - TSS region transcription start site region 164170
Tssr164171 X 135210765 to 135210789 24 - TSS region transcription start site region 164171