Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:134646649-134966681

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19502 X 134649743 to 134650816 1073 - pseudogene predicted gene, 19502
DXMit129 X 134651398 to 134651538 140 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 129
Tssr162004 X 134681469 to 134681492 23 + TSS region transcription start site region 162004
Gm7857 X 134681520 to 134681877 357 + pseudogene predicted gene 7857
B230119M05Rik X 134684562 to 134686462 1900 - lncRNA gene RIKEN cDNA B230119M05 gene
Tssr162005 X 134685117 to 134685149 32 + TSS region transcription start site region 162005
Tssr162006 X 134685161 to 134685179 18 + TSS region transcription start site region 162006
Tssr162007 X 134685208 to 134685258 50 + TSS region transcription start site region 162007
Cpgi22944 X 134686339 to 134686734 395 CpG island CpG island 22944
Armcx4 X 134686519 to 134696757 10238 + protein coding gene armadillo repeat containing, X-linked 4
Tssr162008 X 134686528 to 134686536 8 + TSS region transcription start site region 162008
Tssr162009 X 134686548 to 134686569 21 + TSS region transcription start site region 162009
Tssr162010 X 134687090 to 134687106 16 + TSS region transcription start site region 162010
DXErtd573e X 134697508 to 134697756 248 DNA segment DNA segment, Chr X, ERATO Doi 573, expressed
Tssr162011 X 134717914 to 134717920 6 + TSS region transcription start site region 162011
Tssr162012 X 134717930 to 134717941 11 + TSS region transcription start site region 162012
Tssr162013 X 134717943 to 134718018 75 + TSS region transcription start site region 162013
Armcx1 X 134717963 to 134721917 3954 + protein coding gene armadillo repeat containing, X-linked 1
Gm39534 X 134723285 to 134729919 6634 + lncRNA gene predicted gene, 39534
Gm16397 X 134731571 to 134732064 493 + pseudogene predicted pseudogene 16397
Gm10344 X 134745495 to 134746913 1418 - unclassified gene predicted gene 10344
Armcx6 X 134748461 to 134751417 2956 - protein coding gene armadillo repeat containing, X-linked 6
Tssr164156 X 134751370 to 134751424 54 - TSS region transcription start site region 164156
Tssr162014 X 134756563 to 134756617 54 + TSS region transcription start site region 162014
Armcx3 X 134756595 to 134761455 4860 + protein coding gene armadillo repeat containing, X-linked 3
Mir7093 X 134757631 to 134757731 100 + miRNA gene microRNA 7093
Armcx2 X 134804145 to 134809221 5076 - protein coding gene armadillo repeat containing, X-linked 2
Tssr164157 X 134806649 to 134806681 32 - TSS region transcription start site region 164157
Tssr164158 X 134808984 to 134809002 18 - TSS region transcription start site region 164158
Gm7222 X 134828140 to 134829045 905 - pseudogene predicted gene 7222
Gm15018 X 134906002 to 134906622 620 - pseudogene predicted gene 15018
Nxf2 X 134944526 to 134964754 20228 - protein coding gene nuclear RNA export factor 2
Del(XNxf2-Nxf3)1Jw X 134944526 to 136085255 1140729 chromosomal deletion deletion, Chr X, Jeremy Wang 1
Cpgi22945 X 134963697 to 134964017 320 CpG island CpG island 22945
Tssr164159 X 134964695 to 134964726 31 - TSS region transcription start site region 164159
Tssr164160 X 134964742 to 134964767 25 - TSS region transcription start site region 164160