Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:134085382-134505404

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cstf2 X 134059187 to 134086819 27632 + protein coding gene cleavage stimulation factor, 3' pre-RNA subunit 2
Nox1 X 134086421 to 134137711 51290 - protein coding gene NADPH oxidase 1
Tssr164131 X 134111766 to 134111788 22 - TSS region transcription start site region 164131
Tssr164132 X 134111806 to 134111814 8 - TSS region transcription start site region 164132
Tssr164133 X 134111826 to 134111836 10 - TSS region transcription start site region 164133
Tssr164134 X 134111852 to 134111873 21 - TSS region transcription start site region 164134
Xkrx X 134149043 to 134162076 13033 - protein coding gene X-linked Kx blood group related, X-linked
Tssr164135 X 134162476 to 134162495 19 - TSS region transcription start site region 164135
Tssr164136 X 134162505 to 134162512 7 - TSS region transcription start site region 164136
Tssr164137 X 134162948 to 134162966 18 - TSS region transcription start site region 164137
Tssr164138 X 134162977 to 134162998 21 - TSS region transcription start site region 164138
Tssr161989 X 134187492 to 134187503 11 + TSS region transcription start site region 161989
Arl13a X 134187501 to 134208028 20527 + protein coding gene ADP-ribosylation factor-like 13A
Tssr161990 X 134187505 to 134187513 8 + TSS region transcription start site region 161990
Trmt2b X 134222955 to 134277026 54071 - protein coding gene TRM2 tRNA methyltransferase 2B
Tssr164139 X 134276888 to 134276968 80 - TSS region transcription start site region 164139
Tssr164140 X 134276969 to 134276980 11 - TSS region transcription start site region 164140
Tmem35a X 134295225 to 134305969 10744 + protein coding gene transmembrane protein 35A
Tssr161991 X 134295382 to 134295404 22 + TSS region transcription start site region 161991
Cpgi22937 X 134307913 to 134308257 344 CpG island CpG island 22937
Cenpi X 134308084 to 134362639 54555 + protein coding gene centromere protein I
Tssr161992 X 134308139 to 134308209 70 + TSS region transcription start site region 161992
Tssr161993 X 134404543 to 134404589 46 + TSS region transcription start site region 161993
Drp2 X 134404628 to 134456574 51946 + protein coding gene dystrophin related protein 2
Tssr161994 X 134404808 to 134404897 89 + TSS region transcription start site region 161994
Tssr161995 X 134425221 to 134425236 15 + TSS region transcription start site region 161995
Tssr161996 X 134427019 to 134427029 10 + TSS region transcription start site region 161996
Tssr161997 X 134427035 to 134427054 19 + TSS region transcription start site region 161997
Tssr161998 X 134427056 to 134427079 23 + TSS region transcription start site region 161998
Taf7l X 134460118 to 134476490 16372 - protein coding gene TATA-box binding protein associated factor 7 like
Tssr161999 X 134465976 to 134465979 3 + TSS region transcription start site region 161999
Cpgi22938 X 134474982 to 134476245 1263 CpG island CpG island 22938
Tssr164141 X 134474986 to 134475016 30 - TSS region transcription start site region 164141
Tssr164142 X 134476479 to 134476495 16 - TSS region transcription start site region 164142
Cpgi22939 X 134489016 to 134489179 163 CpG island CpG island 22939
Gm16410 X 134489370 to 134490143 773 + pseudogene predicted gene 16410
Gm23124 X 134496810 to 134496916 106 + snRNA gene predicted gene, 23124