Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:13292032-13492827

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddx3x X 13280970 to 13294052 13082 + protein coding gene DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Tssr160597 X 13297589 to 13297600 11 + TSS region transcription start site region 160597
Tssr160598 X 13302254 to 13302267 13 + TSS region transcription start site region 160598
Gm5380 X 13302285 to 13304417 2132 + pseudogene predicted gene 5380
Gm7129 X 13326023 to 13327019 996 - pseudogene predicted gene 7129
Gm34661 X 13343546 to 13348150 4604 - lncRNA gene predicted gene, 34661
Tssr163015 X 13345306 to 13345322 16 - TSS region transcription start site region 163015
Tssr5595 X 13358265 to 13358274 9 + TSS region transcription start site region 5595
Gm9434 X 13377866 to 13378678 812 - pseudogene predicted gene 9434
Gm4728 X 13392032 to 13392827 795 + pseudogene predicted gene 4728
DXMit85 X 13398815 to 13398952 137 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 85
Gm18106 X 13400384 to 13403623 3239 - pseudogene predicted gene, 18106
Tssr160599 X 13422358 to 13422366 8 + TSS region transcription start site region 160599
DXMit52 X 13459838 to 13459965 127 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 52
Cpgi22634 X 13461618 to 13462104 486 CpG island CpG island 22634
Nyx X 13466110 to 13489313 23203 + protein coding gene nyctalopin
Cpgi22635 X 13485900 to 13487042 1142 CpG island CpG island 22635
Gm14506 X 13490498 to 13491033 535 - pseudogene predicted gene 14506