MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:13219170-13349192

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
DXErtd11e	X	13220718 to 13220940	222		DNA segment	DNA segment, Chr X, ERATO Doi 11, expressed
2010308F09Rik	X	13234641 to 13247733	13092	-	lincRNA gene	RIKEN cDNA 2010308F09 gene
Gm16481	X	13238327 to 13239550	1223	+	pseudogene	predicted gene 16481
Tssr160590	X	13256683 to 13256712	29	+	TSS region	transcription start site region 160590
Cpgi22633	X	13280799 to 13282249	1450		CpG island	CpG island 22633
Ddx3x	X	13280970 to 13294052	13082	+	protein coding gene	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Tssr160591	X	13281013 to 13281031	18	+	TSS region	transcription start site region 160591
Tssr160592	X	13284170 to 13284192	22	+	TSS region	transcription start site region 160592
Tssr160593	X	13284918 to 13284922	4	+	TSS region	transcription start site region 160593
Tssr160594	X	13287238 to 13287253	15	+	TSS region	transcription start site region 160594
Tssr160595	X	13289430 to 13289447	17	+	TSS region	transcription start site region 160595
Tssr160596	X	13291477 to 13291493	16	+	TSS region	transcription start site region 160596
Tssr160597	X	13297589 to 13297600	11	+	TSS region	transcription start site region 160597
Tssr160598	X	13302254 to 13302267	13	+	TSS region	transcription start site region 160598
Gm5380	X	13302285 to 13304417	2132	+	pseudogene	predicted gene 5380
Gm7129	X	13326023 to 13327019	996	-	pseudogene	predicted gene 7129
Gm34661	X	13343546 to 13348150	4604	-	lncRNA gene	predicted gene, 34661
Tssr163015	X	13345306 to 13345322	16	-	TSS region	transcription start site region 163015