MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:13153620-13283656

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Usp9x	X	13071498 to 13173328	101830	+	protein coding gene	ubiquitin specific peptidase 9, X chromosome
Tssr160587	X	13159831 to 13159860	29	+	TSS region	transcription start site region 160587
Gm15027	X	13179443 to 13179580	137	+	pseudogene	predicted gene 15027
Gm14536	X	13189538 to 13189675	137	+	pseudogene	predicted gene 14536
Tssr160588	X	13202542 to 13202546	4	+	TSS region	transcription start site region 160588
Rpl3-ps1	X	13202571 to 13203780	1209	+	pseudogene	ribosomal protein L3, pseudogene 1
Tssr160589	X	13202601 to 13202619	18	+	TSS region	transcription start site region 160589
DXMit187	X	13212401 to 13212524	123		DNA segment	DNA Segment, Chr X, Massachusetts Institute of Technology 187
n-R5s3	X	13215698 to 13215809	111	-	rRNA gene	nuclear encoded rRNA 5S 3
Llph-ps2	X	13218210 to 13218602	392	-	pseudogene	LLP homolog, pseudogene 2
Tssr163014	X	13218620 to 13218656	36	-	TSS region	transcription start site region 163014
DXErtd11e	X	13220718 to 13220940	222		DNA segment	DNA segment, Chr X, ERATO Doi 11, expressed
2010308F09Rik	X	13234641 to 13247733	13092	-	lincRNA gene	RIKEN cDNA 2010308F09 gene
Gm16481	X	13238327 to 13239550	1223	+	pseudogene	predicted gene 16481
Tssr160590	X	13256683 to 13256712	29	+	TSS region	transcription start site region 160590
Cpgi22633	X	13280799 to 13282249	1450		CpG island	CpG island 22633
Ddx3x	X	13280970 to 13294052	13082	+	protein coding gene	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Tssr160591	X	13281013 to 13281031	18	+	TSS region	transcription start site region 160591