Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:130863714-134243844

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit79 X 130863870 to 130864007 137 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 79
Gct6 X 130864007 to 48090244 -82773763 QTL granulosa cell tumorigenesis 6
Gm26209 X 130887669 to 130887778 109 - miRNA gene predicted gene, 26209
C86400 X 130898863 to 130899590 727 unclassified gene expressed sequence C86400
Gm25170 X 130915299 to 130915427 128 - snoRNA gene predicted gene, 25170
DXMit232 X 131015776 to 131015924 148 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 232
Gm14976 X 131017685 to 131019078 1393 - pseudogene predicted gene 14976
Gm7790 X 131172439 to 131173748 1309 - pseudogene predicted gene 7790
DXMit117 X 131288026 to 131288151 125 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 117
Gm14977 X 131558115 to 131559023 908 - pseudogene predicted gene 14977
Gm4994 X 131847887 to 131850073 2186 - pseudogene predicted gene 4994
Tssr164112 X 131850466 to 131850500 34 - TSS region transcription start site region 164112
Tssr5680 X 132146959 to 132146960 1 + TSS region transcription start site region 5680
Gm7058 X 132169206 to 132170107 901 - pseudogene predicted gene 7058
Gm14981 X 132187316 to 132188258 942 - pseudogene predicted gene 14981
Gm26406 X 132507131 to 132507254 123 + snoRNA gene predicted gene, 26406
Gm23768 X 132553714 to 132553844 130 - snoRNA gene predicted gene, 23768
Gm22143 X 132681887 to 132682089 202 + unclassified non-coding RNA gene predicted gene, 22143
Gm7820 X 132888108 to 132889159 1051 - pseudogene predicted gene 7820
Gm7821 X 133030217 to 133030985 768 - pseudogene predicted gene 7821
Gm7823 X 133093943 to 133095556 1613 - pseudogene predicted gene 7823
Gm14979 X 133210631 to 133211520 889 + pseudogene predicted gene 14979
Gm22552 X 133376217 to 133376553 336 - unclassified non-coding RNA gene predicted gene, 22552
Gm14980 X 133406375 to 133407110 735 - pseudogene predicted gene 14980
Gm2970 X 133541110 to 133543706 2596 + pseudogene predicted gene 2970
Pcdh19 X 133582860 to 133688987 106127 - protein coding gene protocadherin 19
Cpgi22933 X 133588017 to 133588306 289 CpG island CpG island 22933
Cpgi22934 X 133686087 to 133689082 2995 CpG island CpG island 22934
Gm26851 X 133687780 to 133707262 19482 + lincRNA gene predicted gene, 26851
Tssr164113 X 133688978 to 133689005 27 - TSS region transcription start site region 164113
Tssr164114 X 133689007 to 133689016 9 - TSS region transcription start site region 164114
Tssr164115 X 133689046 to 133689055 9 - TSS region transcription start site region 164115
Cpgi22935 X 133689965 to 133690131 166 CpG island CpG island 22935
DXMit130 X 133764173 to 133764341 168 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 130
Stol X 133764341 to 66047855 -67716486 heritable phenotypic marker stripy oily
Tnmd X 133851008 to 133865577 14569 + protein coding gene tenomodulin
Tssr161977 X 133851115 to 133851129 14 + TSS region transcription start site region 161977
Tssr161978 X 133859691 to 133859706 15 + TSS region transcription start site region 161978
Tspan6 X 133891068 to 133898429 7361 - protein coding gene tetraspanin 6
Tssr164116 X 133898292 to 133898377 85 - TSS region transcription start site region 164116
Tssr164117 X 133898399 to 133898413 14 - TSS region transcription start site region 164117
4930570D08Rik X 133898699 to 133901213 2514 - unclassified gene RIKEN cDNA 4930570D08 gene
Tssr164118 X 133900173 to 133900198 25 - TSS region transcription start site region 164118
Tssr164119 X 133901209 to 133901219 10 - TSS region transcription start site region 164119
Tssr161979 X 133908418 to 133908430 12 + TSS region transcription start site region 161979
Srpx2 X 133908426 to 133932446 24020 + protein coding gene sushi-repeat-containing protein, X-linked 2
Tssr161980 X 133908441 to 133908462 21 + TSS region transcription start site region 161980
Tssr161981 X 133908474 to 133908481 7 + TSS region transcription start site region 161981
Tssr161982 X 133908606 to 133908634 28 + TSS region transcription start site region 161982
Tssr161983 X 133908635 to 133908658 23 + TSS region transcription start site region 161983
Tssr161984 X 133908667 to 133908709 42 + TSS region transcription start site region 161984
Sytl4 X 133936385 to 133981812 45427 - protein coding gene synaptotagmin-like 4
Tssr164120 X 133960726 to 133960755 29 - TSS region transcription start site region 164120
Tssr164121 X 133961627 to 133961649 22 - TSS region transcription start site region 164121
Tssr164122 X 133961674 to 133961677 3 - TSS region transcription start site region 164122
Tssr164123 X 133961721 to 133961730 9 - TSS region transcription start site region 164123
Tssr164124 X 133961747 to 133961754 7 - TSS region transcription start site region 164124
Tssr164125 X 133961760 to 133961761 1 - TSS region transcription start site region 164125
Tssr164126 X 133961772 to 133961775 3 - TSS region transcription start site region 164126
Tssr164127 X 133961833 to 133961854 21 - TSS region transcription start site region 164127
Tssr164128 X 133981707 to 133981719 12 - TSS region transcription start site region 164128
Tssr164129 X 133981722 to 133981754 32 - TSS region transcription start site region 164129
Tssr164130 X 133981765 to 133981812 47 - TSS region transcription start site region 164130
Gm7841 X 134053615 to 134054473 858 - pseudogene predicted gene 7841
Cpgi22936 X 134058982 to 134059876 894 CpG island CpG island 22936
Tssr161985 X 134059108 to 134059112 4 + TSS region transcription start site region 161985
Tssr161986 X 134059137 to 134059213 76 + TSS region transcription start site region 161986
Cstf2 X 134059187 to 134086819 27632 + protein coding gene cleavage stimulation factor, 3' pre-RNA subunit 2
Tssr161987 X 134059261 to 134059272 11 + TSS region transcription start site region 161987
Tssr161988 X 134059315 to 134059366 51 + TSS region transcription start site region 161988
Mir3112 X 134075316 to 134075397 81 + miRNA gene microRNA 3112
9330119M13Rik X 134076787 to 134079680 2893 unclassified non-coding RNA gene RIKEN cDNA 9330119M13 gene
Nox1 X 134086421 to 134137711 51290 - protein coding gene NADPH oxidase 1
Tssr164131 X 134111766 to 134111788 22 - TSS region transcription start site region 164131
Tssr164132 X 134111806 to 134111814 8 - TSS region transcription start site region 164132
Tssr164133 X 134111826 to 134111836 10 - TSS region transcription start site region 164133
Tssr164134 X 134111852 to 134111873 21 - TSS region transcription start site region 164134
Xkrx X 134149043 to 134162076 13033 - protein coding gene X-linked Kx blood group related, X-linked
Tssr164135 X 134162476 to 134162495 19 - TSS region transcription start site region 164135
Tssr164136 X 134162505 to 134162512 7 - TSS region transcription start site region 164136
Tssr164137 X 134162948 to 134162966 18 - TSS region transcription start site region 164137
Tssr164138 X 134162977 to 134162998 21 - TSS region transcription start site region 164138
Tssr161989 X 134187492 to 134187503 11 + TSS region transcription start site region 161989
Arl13a X 134187501 to 134208028 20527 + protein coding gene ADP-ribosylation factor-like 13A
Tssr161990 X 134187505 to 134187513 8 + TSS region transcription start site region 161990
Trmt2b X 134222955 to 134277026 54071 - protein coding gene TRM2 tRNA methyltransferase 2B