Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:12443214-12903660

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit206 X 12443815 to 12443917 102 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 206
Rpl30-ps11 X 12456886 to 12457230 344 - pseudogene ribosomal protein L30, pseudogene 11
Tssr162996 X 12457292 to 12457302 10 - TSS region transcription start site region 162996
Gm17861 X 12576987 to 12578406 1419 + pseudogene predicted gene, 17861
Cpgi22626 X 12587446 to 12588089 643 CpG island CpG island 22626
Tssr160561 X 12587791 to 12587846 55 + TSS region transcription start site region 160561
Atp6ap2 X 12587801 to 12617049 29248 + protein coding gene ATPase, H+ transporting, lysosomal accessory protein 2
Tssr160562 X 12587864 to 12587877 13 + TSS region transcription start site region 160562
Tssr160563 X 12609487 to 12609513 26 + TSS region transcription start site region 160563
Tssr160564 X 12615676 to 12615857 181 + TSS region transcription start site region 160564
Tssr162997 X 12616737 to 12616747 10 - TSS region transcription start site region 162997
Gm9432 X 12619474 to 12620232 758 - pseudogene predicted gene 9432
Tssr160565 X 12652238 to 12652241 3 + TSS region transcription start site region 160565
Tssr160566 X 12652248 to 12652262 14 + TSS region transcription start site region 160566
Cpgi22627 X 12652267 to 12652581 314 CpG island CpG island 22627
Tssr160567 X 12652272 to 12652286 14 + TSS region transcription start site region 160567
Gm4984 X 12652303 to 12652662 359 + pseudogene predicted pseudogene 4984
1810030O07Rik X 12654879 to 12673668 18789 - protein coding gene RIKEN cDNA 1810030O07 gene
Gm16265 X 12670635 to 12670742 107 + pseudogene predicted gene 16265
Cpgi22628 X 12673214 to 12673660 446 CpG island CpG island 22628
Tssr160568 X 12673275 to 12673290 15 + TSS region transcription start site region 160568
Tssr162998 X 12673540 to 12673583 43 - TSS region transcription start site region 162998
Med14 X 12675369 to 12762073 86704 - protein coding gene mediator complex subunit 14
Tssr162999 X 12677585 to 12677612 27 - TSS region transcription start site region 162999
Tssr163000 X 12732967 to 12732972 5 - TSS region transcription start site region 163000
Cpgi22629 X 12761364 to 12762648 1284 CpG island CpG island 22629
Tssr163001 X 12761783 to 12761842 59 - TSS region transcription start site region 163001
Tssr163002 X 12761954 to 12761969 15 - TSS region transcription start site region 163002
Tssr163003 X 12761996 to 12762040 44 - TSS region transcription start site region 163003
Tssr163004 X 12762069 to 12762080 11 - TSS region transcription start site region 163004
Tssr163005 X 12762090 to 12762113 23 - TSS region transcription start site region 163005
Tssr163006 X 12762120 to 12762125 5 - TSS region transcription start site region 163006
Tssr160569 X 12762245 to 12762293 48 + TSS region transcription start site region 160569
Gm14634 X 12762278 to 12821492 59214 + lncRNA gene predicted gene 14634
Tssr160570 X 12762466 to 12762470 4 + TSS region transcription start site region 160570
Tssr5594 X 12826328 to 12826330 2 + TSS region transcription start site region 5594
Tssr160571 X 12840414 to 12840433 19 + TSS region transcription start site region 160571
Gm25063 X 12870269 to 12870362 93 - miRNA gene predicted gene, 25063
Tssr160572 X 12888209 to 12888256 47 + TSS region transcription start site region 160572