Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:123781274-124531518

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cldn34c3 X 123793665 to 123813765 20100 + protein coding gene claudin 34C3
Astx5 X 123890522 to 123893407 2885 - lincRNA gene amplified spermatogenic transcripts X encoded 5
Rps12-ps20 X 123957274 to 123957675 401 + pseudogene ribosomal protein S12, pseudogene 20
Gm5945 X 124016018 to 124044356 28338 + protein coding gene predicted gene 5945
Tssr164102 X 124109791 to 124109803 12 - TSS region transcription start site region 164102
Tssr164103 X 124109842 to 124109863 21 - TSS region transcription start site region 164103
Vmn2r121 X 124127339 to 124135910 8571 - protein coding gene vomeronasal 2, receptor 121
Cpgi22927 X 124155554 to 124155723 169 CpG island CpG island 22927
Cpgi22928 X 124156274 to 124156518 244 CpG island CpG island 22928
Rps12-ps6 X 124349725 to 124350123 398 - pseudogene ribosomal protein S12, pseudogene 6
Astx1a X 124407642 to 124410527 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 1A
Rps12-ps11 X 124469959 to 124470357 398 - pseudogene ribosomal protein S12, pseudogene 11
Gm17584 X 124500563 to 124501060 497 + protein coding gene predicted gene, 17584
Astx4a X 124530162 to 124533047 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 4A