Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:123761237-126064122

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cldn34c3 X 123793665 to 123813765 20100 + protein coding gene claudin 34C3
Astx5 X 123890522 to 123893407 2885 - lincRNA gene amplified spermatogenic transcripts X encoded 5
Rps12-ps20 X 123957274 to 123957675 401 + pseudogene ribosomal protein S12, pseudogene 20
Gm5945 X 124016018 to 124044356 28338 + protein coding gene predicted gene 5945
Tssr164102 X 124109791 to 124109803 12 - TSS region transcription start site region 164102
Tssr164103 X 124109842 to 124109863 21 - TSS region transcription start site region 164103
Vmn2r121 X 124127339 to 124135910 8571 - protein coding gene vomeronasal 2, receptor 121
Cpgi22927 X 124155554 to 124155723 169 CpG island CpG island 22927
Cpgi22928 X 124156274 to 124156518 244 CpG island CpG island 22928
Rps12-ps6 X 124349725 to 124350123 398 - pseudogene ribosomal protein S12, pseudogene 6
Astx1a X 124407642 to 124410527 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 1A
Rps12-ps11 X 124469959 to 124470357 398 - pseudogene ribosomal protein S12, pseudogene 11
Gm17584 X 124500563 to 124501060 497 + protein coding gene predicted gene, 17584
Astx4a X 124530162 to 124533047 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 4A
Rps12-ps12 X 124599364 to 124599762 398 - pseudogene ribosomal protein S12, pseudogene 12
Gm17469 X 124629893 to 124630390 497 + protein coding gene predicted gene, 17469
Astx4b X 124659500 to 124662385 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 4B
Rps12-ps18 X 124855729 to 124856127 398 - pseudogene ribosomal protein S12, pseudogene 18
Astx1b X 124911237 to 124914122 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 1B
Rps12-ps15 X 124973550 to 124973948 398 - pseudogene ribosomal protein S12, pseudogene 15
Gm17361 X 125004163 to 125004660 497 + protein coding gene predicted gene, 17361
Gm21571 X 125404946 to 125405372 426 - pseudogene predicted gene, 21571
Gm21616 X 125435542 to 125436039 497 + protein coding gene predicted gene, 21616
Rps12-ps17 X 125547773 to 125548171 398 - pseudogene ribosomal protein S12, pseudogene 17
Astx4c X 125605682 to 125608567 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 4C
Rps12-ps13 X 125674833 to 125675231 398 - pseudogene ribosomal protein S12, pseudogene 13
Gm17693 X 125705444 to 125705941 497 + protein coding gene predicted gene, 17693
Astx1c X 125735043 to 125737928 2885 + lincRNA gene amplified spermatogenic transcripts X encoded 1C
Rps12-ps14 X 125857683 to 125858081 398 - pseudogene ribosomal protein S12, pseudogene 14
Gm17522 X 125888197 to 125888724 527 + lincRNA gene predicted gene, 17522
Astx4d X 125917810 to 125920696 2886 + lincRNA gene amplified spermatogenic transcripts X encoded 4D
Rps12-ps16 X 125986966 to 125987364 398 - pseudogene ribosomal protein S12, pseudogene 16
Gm17267 X 126017557 to 126018055 498 + protein coding gene predicted gene, 17267
Astx3 X 126042545 to 126045431 2886 + lincRNA gene amplified spermatogenic transcripts X encoded 3