Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:12156886-12757230

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcor X 12036740 to 12160355 123615 - protein coding gene BCL6 interacting corepressor
Tssr160560 X 12157708 to 12157712 4 + TSS region transcription start site region 160560
Cpgi22623 X 12158431 to 12159135 704 CpG island CpG island 22623
Cpgi22624 X 12159645 to 12160596 951 CpG island CpG island 22624
Tssr162993 X 12160455 to 12160479 24 - TSS region transcription start site region 162993
Tssr162994 X 12160492 to 12160523 31 - TSS region transcription start site region 162994
Gm14521 X 12179718 to 12180067 349 - pseudogene predicted gene 14521
Cpgi22625 X 12252463 to 12252719 256 CpG island CpG island 22625
DXMit205.2 X 12326540 to 12326660 120 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 205.2
DXMit205 X 12326643 to 12326804 161 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 205
Gm14635 X 12339782 to 12354996 15214 - lincRNA gene predicted gene 14635
Tssr162995 X 12354979 to 12355006 27 - TSS region transcription start site region 162995
DXMit103 X 12429717 to 12429863 146 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 103
DXMit224 X 12440280 to 12440395 115 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 224
DXMit206 X 12443815 to 12443917 102 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 206
Rpl30-ps11 X 12456886 to 12457230 344 - pseudogene ribosomal protein L30, pseudogene 11
Tssr162996 X 12457292 to 12457302 10 - TSS region transcription start site region 162996
Gm17861 X 12576987 to 12578406 1419 + pseudogene predicted gene, 17861
Cpgi22626 X 12587446 to 12588089 643 CpG island CpG island 22626
Tssr160561 X 12587791 to 12587846 55 + TSS region transcription start site region 160561
Atp6ap2 X 12587801 to 12617049 29248 + protein coding gene ATPase, H+ transporting, lysosomal accessory protein 2
Tssr160562 X 12587864 to 12587877 13 + TSS region transcription start site region 160562
Tssr160563 X 12609487 to 12609513 26 + TSS region transcription start site region 160563
Tssr160564 X 12615676 to 12615857 181 + TSS region transcription start site region 160564
Tssr162997 X 12616737 to 12616747 10 - TSS region transcription start site region 162997
Gm9432 X 12619474 to 12620232 758 - pseudogene predicted gene 9432
Tssr160565 X 12652238 to 12652241 3 + TSS region transcription start site region 160565
Tssr160566 X 12652248 to 12652262 14 + TSS region transcription start site region 160566
Cpgi22627 X 12652267 to 12652581 314 CpG island CpG island 22627
Tssr160567 X 12652272 to 12652286 14 + TSS region transcription start site region 160567
Gm4984 X 12652303 to 12652662 359 + pseudogene predicted pseudogene 4984
1810030O07Rik X 12654879 to 12673668 18789 - protein coding gene RIKEN cDNA 1810030O07 gene
Gm16265 X 12670635 to 12670742 107 + pseudogene predicted gene 16265
Cpgi22628 X 12673214 to 12673660 446 CpG island CpG island 22628
Tssr160568 X 12673275 to 12673290 15 + TSS region transcription start site region 160568
Tssr162998 X 12673540 to 12673583 43 - TSS region transcription start site region 162998
Med14 X 12675369 to 12762073 86704 - protein coding gene mediator complex subunit 14
Tssr162999 X 12677585 to 12677612 27 - TSS region transcription start site region 162999
Tssr163000 X 12732967 to 12732972 5 - TSS region transcription start site region 163000