Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:118427548-121367549

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgif2lx2 X 118427227 to 118428256 1029 + protein coding gene TGFB-induced factor homeobox 2-like, X-linked 2
Tgif2lx1 X 118479708 to 118480729 1021 - protein coding gene TGFB-induced factor homeobox 2-like, X-linked 1
DXMit246 X 118616887 to 118616985 98 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-246
Gm7485 X 118697795 to 118698903 1108 - pseudogene predicted gene 7485
Tssr5678 X 118799096 to 118799097 1 + TSS region transcription start site region 5678
DXMit97 X 119353239 to 119353371 132 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 97
Tssr161922 X 119386239 to 119386258 19 + TSS region transcription start site region 161922
Gm14926 X 119413336 to 119413989 653 + pseudogene predicted gene 14926
Gm26182 X 119526544 to 119526659 115 - snoRNA gene predicted gene, 26182
Gm14929 X 119747626 to 119749677 2051 - lincRNA gene predicted gene 14929
Tssr164095 X 119853571 to 119853589 18 - TSS region transcription start site region 164095
Tssr164096 X 119897548 to 119897549 1 - TSS region transcription start site region 164096
Cpgi22922 X 119927023 to 119927352 329 CpG island CpG island 22922
Pabpc5 X 119927196 to 119930165 2969 + protein coding gene poly(A) binding protein, cytoplasmic 5
9330184L24Rik X 119932217 to 119935014 2797 unclassified gene RIKEN cDNA 9330184L24 gene
Gm4913 X 119966284 to 119967570 1286 + pseudogene predicted gene 4913
Gm16420 X 120114981 to 120115826 845 + pseudogene predicted gene 16420
Tssr161923 X 120160637 to 120160638 1 + TSS region transcription start site region 161923
Gm5863 X 120160710 to 120161717 1007 + pseudogene predicted gene 5863
Gm14928 X 120178939 to 120179415 476 + pseudogene predicted gene 14928
Gm30577 X 120282377 to 120290214 7837 - lncRNA gene predicted gene, 30577
Pcdh11x X 120290318 to 120910622 620304 + protein coding gene protocadherin 11 X-linked
Tssr161924 X 120290319 to 120290333 14 + TSS region transcription start site region 161924
Cpgi22923 X 120292780 to 120293321 541 CpG island CpG island 22923
H2afb3 X 120312748 to 120313095 347 - protein coding gene H2A histone family, member B3
Gm14931 X 120345362 to 120345614 252 - pseudogene predicted gene 14931
Gm14927 X 120371212 to 120371665 453 + pseudogene predicted gene 14927
Tssr161925 X 120431746 to 120431748 2 + TSS region transcription start site region 161925
Gm14930 X 120442035 to 120442686 651 - pseudogene predicted gene 14930
Tssr161926 X 120718865 to 120718871 6 + TSS region transcription start site region 161926
Gm4993 X 120957711 to 120958884 1173 + pseudogene predicted gene 4993
Gm22590 X 121011835 to 121011962 127 + snoRNA gene predicted gene, 22590
Gm5394 X 121177011 to 121177982 971 - pseudogene predicted gene 5394
Gm25825 X 121308217 to 121308340 123 - snoRNA gene predicted gene, 25825
Gm5648 X 121334991 to 121336574 1583 - pseudogene predicted pseudogene 5648