Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:114263702-117103703

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr161899 X 114284557 to 114284571 14 + TSS region transcription start site region 161899
Tssr161900 X 114284603 to 114284614 11 + TSS region transcription start site region 161900
Tssr161901 X 114284647 to 114284658 11 + TSS region transcription start site region 161901
Tssr161902 X 114474312 to 114474353 41 + TSS region transcription start site region 161902
Klhl4 X 114474333 to 114560829 86496 + protein coding gene kelch-like 4
Tssr161903 X 114474387 to 114474399 12 + TSS region transcription start site region 161903
Tssr161904 X 114474423 to 114474434 11 + TSS region transcription start site region 161904
Tssr161905 X 114474483 to 114474499 16 + TSS region transcription start site region 161905
Tssr161906 X 114474509 to 114474522 13 + TSS region transcription start site region 161906
Tssr161907 X 114474569 to 114474593 24 + TSS region transcription start site region 161907
Tssr161908 X 114474600 to 114474614 14 + TSS region transcription start site region 161908
Tssr161909 X 114474634 to 114474655 21 + TSS region transcription start site region 161909
Gm14895 X 114491111 to 114491516 405 + pseudogene predicted gene 14895
Gm1866 X 114592048 to 114592524 476 - pseudogene predicted gene 1866
Gm14894 X 114662197 to 114662466 269 + pseudogene predicted gene 14894
Gm5942 X 114774319 to 114774757 438 - pseudogene predicted gene 5942
Gm14897 X 114857887 to 114858093 206 + pseudogene predicted gene 14897
Tssr161910 X 114897781 to 114897783 2 + TSS region transcription start site region 161910
Tssr161911 X 114904982 to 114904994 12 + TSS region transcription start site region 161911
Tssr161912 X 114904995 to 114905025 30 + TSS region transcription start site region 161912
Ube2dnl1 X 114905012 to 114905941 929 + protein coding gene ubiquitin-conjugating enzyme E2D N-terminal like 1
Tssr161913 X 114907575 to 114907586 11 + TSS region transcription start site region 161913
Ube2dnl2 X 114907582 to 114908510 928 + protein coding gene ubiquitin-conjugating enzyme E2D N-terminal like 2
Tssr161914 X 114907588 to 114907600 12 + TSS region transcription start site region 161914
4930555B12Rik X 114926989 to 114928597 1608 + lincRNA gene RIKEN cDNA 4930555B12 gene
Gm4914 X 114948913 to 114949371 458 + pseudogene predicted gene 4914
Gm7429 X 114980970 to 114981317 347 - pseudogene predicted pseudogene 7429
Tssr164091 X 114981387 to 114981390 3 - TSS region transcription start site region 164091
Gm5943 X 114989150 to 114989608 458 + pseudogene predicted pseudogene 5943
Tssr5675 X 115089790 to 115089804 14 + TSS region transcription start site region 5675
Gm14905 X 115280377 to 115283443 3066 - pseudogene predicted gene 14905
Gm25366 X 115373841 to 115373964 123 - snRNA gene predicted gene, 25366
Gm27414 X 115398815 to 115399195 380 + snoRNA gene predicted gene, 27414
Gm6461 X 115443399 to 115444031 632 - pseudogene predicted gene 6461
Gm5944 X 115458894 to 115459894 1000 - pseudogene predicted gene 5944
Gm14903 X 115574818 to 115581585 6767 + pseudogene predicted gene 14903
Gm14906 X 115682136 to 115682525 389 + pseudogene predicted gene 14906
Tssr161915 X 115683702 to 115683703 1 + TSS region transcription start site region 161915
Gm14907 X 115808570 to 115809225 655 + pseudogene predicted gene 14907
DXMit39 X 115997180 to 115997329 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 39
Gm24683 X 116123900 to 116123987 87 + miRNA gene predicted gene, 24683
Gm14904 X 116198189 to 116198523 334 + pseudogene predicted gene 14904
Tssr164092 X 116287133 to 116287157 24 - TSS region transcription start site region 164092
Tssr164093 X 116287283 to 116287302 19 - TSS region transcription start site region 164093
Tssr164094 X 116287379 to 116287382 3 - TSS region transcription start site region 164094
Gm24624 X 116345732 to 116345895 163 + snRNA gene predicted gene, 24624
Tssr161916 X 116345733 to 116345738 5 + TSS region transcription start site region 161916
Tssr5676 X 116448927 to 116448931 4 + TSS region transcription start site region 5676
Tssr161917 X 116448939 to 116448948 9 + TSS region transcription start site region 161917
Cpxcr1 X 116448944 to 116478783 29839 + protein coding gene CPX chromosome region, candidate 1
Tssr161918 X 116448958 to 116448969 11 + TSS region transcription start site region 161918
Tssr161919 X 116659070 to 116659077 7 + TSS region transcription start site region 161919
H2afb2 X 116681178 to 116681525 347 + protein coding gene H2A histone family, member B2
Tssr161920 X 116727591 to 116727593 2 + TSS region transcription start site region 161920
Gm24438 X 116748842 to 116748956 114 + snoRNA gene predicted gene, 24438
Gm19152 X 116829647 to 116830333 686 - pseudogene predicted gene, 19152
Gm16373 X 116886881 to 116887183 302 + pseudogene predicted pseudogene 16373
Gm14919 X 116896951 to 116897340 389 + pseudogene predicted gene 14919
Gm18172 X 116984536 to 117002106 17570 - pseudogene predicted gene, 18172
H2afb1 X 117014757 to 117015104 347 + protein coding gene H2A histone family member B1