Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:113054483-115894499

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chm X 113040593 to 113185517 144924 - protein coding gene choroidermia (RAB escort protein 1)
Mir361 X 113074824 to 113074893 69 - miRNA gene microRNA 361
Tssr164088 X 113099457 to 113099476 19 - TSS region transcription start site region 164088
Tssr164089 X 113171974 to 113171983 9 - TSS region transcription start site region 164089
Tssr164090 X 113185485 to 113185522 37 - TSS region transcription start site region 164090
Gm7405 X 113226287 to 113227320 1033 - pseudogene predicted gene 7405
Dach2 X 113297510 to 113836386 538876 + protein coding gene dachshund family transcription factor 2
Tssr161896 X 113298231 to 113298251 20 + TSS region transcription start site region 161896
Tssr161897 X 113298283 to 113298294 11 + TSS region transcription start site region 161897
Cpgi22921 X 113298648 to 113298813 165 CpG island CpG island 22921
Gm24831 X 113332100 to 113332225 125 - snRNA gene predicted gene, 24831
Tssr161898 X 113724324 to 113724349 25 + TSS region transcription start site region 161898
Gm23985 X 113878331 to 113878454 123 - snoRNA gene predicted gene, 23985
Gm4915 X 114021997 to 114023562 1565 + pseudogene predicted gene 4915
Gm14896 X 114036527 to 114037874 1347 + pseudogene predicted gene 14896
Gm7416 X 114052514 to 114054278 1764 - pseudogene predicted gene 7416
Gm7146 X 114198009 to 114198665 656 + pseudogene predicted pseudogene 7146
Tssr161899 X 114284557 to 114284571 14 + TSS region transcription start site region 161899
Tssr161900 X 114284603 to 114284614 11 + TSS region transcription start site region 161900
Tssr161901 X 114284647 to 114284658 11 + TSS region transcription start site region 161901
Tssr161902 X 114474312 to 114474353 41 + TSS region transcription start site region 161902
Klhl4 X 114474333 to 114560829 86496 + protein coding gene kelch-like 4
Tssr161903 X 114474387 to 114474399 12 + TSS region transcription start site region 161903
Tssr161904 X 114474423 to 114474434 11 + TSS region transcription start site region 161904
Tssr161905 X 114474483 to 114474499 16 + TSS region transcription start site region 161905
Tssr161906 X 114474509 to 114474522 13 + TSS region transcription start site region 161906
Tssr161907 X 114474569 to 114474593 24 + TSS region transcription start site region 161907
Tssr161908 X 114474600 to 114474614 14 + TSS region transcription start site region 161908
Tssr161909 X 114474634 to 114474655 21 + TSS region transcription start site region 161909
Gm14895 X 114491111 to 114491516 405 + pseudogene predicted gene 14895
Gm1866 X 114592048 to 114592524 476 - pseudogene predicted gene 1866
Gm14894 X 114662197 to 114662466 269 + pseudogene predicted gene 14894
Gm5942 X 114774319 to 114774757 438 - pseudogene predicted gene 5942
Gm14897 X 114857887 to 114858093 206 + pseudogene predicted gene 14897
Tssr161910 X 114897781 to 114897783 2 + TSS region transcription start site region 161910
Tssr161911 X 114904982 to 114904994 12 + TSS region transcription start site region 161911
Tssr161912 X 114904995 to 114905025 30 + TSS region transcription start site region 161912
Ube2dnl1 X 114905012 to 114905941 929 + protein coding gene ubiquitin-conjugating enzyme E2D N-terminal like 1
Tssr161913 X 114907575 to 114907586 11 + TSS region transcription start site region 161913
Ube2dnl2 X 114907582 to 114908510 928 + protein coding gene ubiquitin-conjugating enzyme E2D N-terminal like 2
Tssr161914 X 114907588 to 114907600 12 + TSS region transcription start site region 161914
4930555B12Rik X 114926989 to 114928597 1608 + lincRNA gene RIKEN cDNA 4930555B12 gene
Gm4914 X 114948913 to 114949371 458 + pseudogene predicted gene 4914
Gm7429 X 114980970 to 114981317 347 - pseudogene predicted pseudogene 7429
Tssr164091 X 114981387 to 114981390 3 - TSS region transcription start site region 164091
Gm5943 X 114989150 to 114989608 458 + pseudogene predicted pseudogene 5943
Tssr5675 X 115089790 to 115089804 14 + TSS region transcription start site region 5675
Gm14905 X 115280377 to 115283443 3066 - pseudogene predicted gene 14905
Gm25366 X 115373841 to 115373964 123 - snRNA gene predicted gene, 25366
Gm27414 X 115398815 to 115399195 380 + snoRNA gene predicted gene, 27414
Gm6461 X 115443399 to 115444031 632 - pseudogene predicted gene 6461
Gm5944 X 115458894 to 115459894 1000 - pseudogene predicted gene 5944
Gm14903 X 115574818 to 115581585 6767 + pseudogene predicted gene 14903
Gm14906 X 115682136 to 115682525 389 + pseudogene predicted gene 14906
Tssr161915 X 115683702 to 115683703 1 + TSS region transcription start site region 161915
Gm14907 X 115808570 to 115809225 655 + pseudogene predicted gene 14907