Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:111065204-112207079

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr161885 X 111110411 to 111110424 13 + TSS region transcription start site region 161885
Cylc1 X 111110418 to 111125854 15436 + protein coding gene cylicin, basic protein of sperm head cytoskeleton 1
Tssr5672 X 111167742 to 111167744 2 + TSS region transcription start site region 5672
Gm10112 X 111168340 to 111168693 353 + pseudogene predicted pseudogene 10112
n-TRcct4 X 111377217 to 111377289 72 + tRNA gene nuclear encoded tRNA arginine 4 (anticodon CCT)
Rps6ka6 X 111388192 to 111537959 149767 - protein coding gene ribosomal protein S6 kinase polypeptide 6
Tssr164066 X 111450662 to 111450673 11 - TSS region transcription start site region 164066
Cpgi22917 X 111462584 to 111463636 1052 CpG island CpG island 22917
Tssr164067 X 111463036 to 111463048 12 - TSS region transcription start site region 164067
Tssr164068 X 111463063 to 111463081 18 - TSS region transcription start site region 164068
Tssr164069 X 111463103 to 111463139 36 - TSS region transcription start site region 164069
Tssr164070 X 111463149 to 111463173 24 - TSS region transcription start site region 164070
Tssr164071 X 111463454 to 111463473 19 - TSS region transcription start site region 164071
Tssr164072 X 111463478 to 111463520 42 - TSS region transcription start site region 164072
Tssr164073 X 111531163 to 111531176 13 - TSS region transcription start site region 164073
Tssr164074 X 111536301 to 111536317 16 - TSS region transcription start site region 164074
Tssr164075 X 111536325 to 111536341 16 - TSS region transcription start site region 164075
Tssr164076 X 111536385 to 111536388 3 - TSS region transcription start site region 164076
Tssr164077 X 111537957 to 111537964 7 - TSS region transcription start site region 164077
Gm7340 X 111571699 to 111574450 2751 + pseudogene predicted gene 7340
Hdx X 111575204 to 111697079 121875 - protein coding gene highly divergent homeobox
Tssr164078 X 111697069 to 111697127 58 - TSS region transcription start site region 164078
Tssr5673 X 111768406 to 111768415 9 - TSS region transcription start site region 5673
Gm14898 X 111830621 to 111831265 644 + pseudogene predicted gene 14898
Gm14899 X 111860628 to 111861175 547 + pseudogene predicted gene 14899
Gm45194 X 111891389 to 112240590 349201 + protein coding gene predicted gene 45194
Cpgi22918 X 111894397 to 111895605 1208 CpG island CpG island 22918
Tssr161886 X 111894951 to 111894962 11 + TSS region transcription start site region 161886
Tssr161887 X 111944396 to 111944410 14 + TSS region transcription start site region 161887
Tex16 X 112011007 to 112127326 116319 + protein coding gene testis expressed gene 16
Gm14900 X 112012720 to 112013452 732 + pseudogene predicted gene 14900
Gm6335 X 112162554 to 112163747 1193 + pseudogene predicted gene 6335