Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:110712742-111622744

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44593 X 110634586 to 110812324 177738 - lincRNA gene predicted gene 44593
Gm4354 X 110734150 to 110736752 2602 unclassified gene predicted gene 4354
Tssr161878 X 110811367 to 110811383 16 + TSS region transcription start site region 161878
Tssr164065 X 110812814 to 110812823 9 - TSS region transcription start site region 164065
Tssr161879 X 110814263 to 110814276 13 + TSS region transcription start site region 161879
Pou3f4 X 110814280 to 110817207 2927 + protein coding gene POU domain, class 3, transcription factor 4
Cpgi22915 X 110814339 to 110814998 659 CpG island CpG island 22915
Tssr161880 X 110814395 to 110814413 18 + TSS region transcription start site region 161880
Tssr161881 X 110814422 to 110814449 27 + TSS region transcription start site region 161881
Tssr161882 X 110814459 to 110814476 17 + TSS region transcription start site region 161882
Cpgi22916 X 110815256 to 110815776 520 CpG island CpG island 22916
Tssr161883 X 110815682 to 110815692 10 + TSS region transcription start site region 161883
Tssr161884 X 110837050 to 110837057 7 + TSS region transcription start site region 161884
Tssr161885 X 111110411 to 111110424 13 + TSS region transcription start site region 161885
Cylc1 X 111110418 to 111125854 15436 + protein coding gene cylicin, basic protein of sperm head cytoskeleton 1
Tssr5672 X 111167742 to 111167744 2 + TSS region transcription start site region 5672
Gm10112 X 111168340 to 111168693 353 + pseudogene predicted pseudogene 10112
n-TRcct4 X 111377217 to 111377289 72 + tRNA gene nuclear encoded tRNA arginine 4 (anticodon CCT)
Rps6ka6 X 111388192 to 111537959 149767 - protein coding gene ribosomal protein S6 kinase polypeptide 6
Tssr164066 X 111450662 to 111450673 11 - TSS region transcription start site region 164066
Cpgi22917 X 111462584 to 111463636 1052 CpG island CpG island 22917
Tssr164067 X 111463036 to 111463048 12 - TSS region transcription start site region 164067
Tssr164068 X 111463063 to 111463081 18 - TSS region transcription start site region 164068
Tssr164069 X 111463103 to 111463139 36 - TSS region transcription start site region 164069
Tssr164070 X 111463149 to 111463173 24 - TSS region transcription start site region 164070
Tssr164071 X 111463454 to 111463473 19 - TSS region transcription start site region 164071
Tssr164072 X 111463478 to 111463520 42 - TSS region transcription start site region 164072
Tssr164073 X 111531163 to 111531176 13 - TSS region transcription start site region 164073
Tssr164074 X 111536301 to 111536317 16 - TSS region transcription start site region 164074
Tssr164075 X 111536325 to 111536341 16 - TSS region transcription start site region 164075
Tssr164076 X 111536385 to 111536388 3 - TSS region transcription start site region 164076
Tssr164077 X 111537957 to 111537964 7 - TSS region transcription start site region 164077
Gm7340 X 111571699 to 111574450 2751 + pseudogene predicted gene 7340
Hdx X 111575204 to 111697079 121875 - protein coding gene highly divergent homeobox