Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:108909843-109109848

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5730416F02Rik X 109001485 to 109002296 811 + pseudogene RIKEN cDNA 5730416F02 gene
Hmgn5 X 109004537 to 109013380 8843 - protein coding gene high-mobility group nucleosome binding domain 5
Tssr164052 X 109005712 to 109005723 11 - TSS region transcription start site region 164052
Gm23322 X 109009681 to 109009847 166 - snRNA gene predicted gene, 23322
Tssr164053 X 109009843 to 109009848 5 - TSS region transcription start site region 164053
Tssr164054 X 109013344 to 109013371 27 - TSS region transcription start site region 164054
Tssr164055 X 109013372 to 109013388 16 - TSS region transcription start site region 164055
Cpgi22914 X 109013377 to 109013726 349 CpG island CpG island 22914
Tssr164056 X 109013389 to 109013398 9 - TSS region transcription start site region 164056
Tssr164057 X 109013460 to 109013471 11 - TSS region transcription start site region 164057
Tssr164058 X 109013473 to 109013484 11 - TSS region transcription start site region 164058
Tssr164059 X 109013490 to 109013501 11 - TSS region transcription start site region 164059
Gm25797 X 109023356 to 109023462 106 - snRNA gene predicted gene, 25797
Tssr161842 X 109095359 to 109095391 32 + TSS region transcription start site region 161842
Tssr161843 X 109095399 to 109095412 13 + TSS region transcription start site region 161843
Sh3bgrl X 109095407 to 109162467 67060 + protein coding gene SH3-binding domain glutamic acid-rich protein like
Tssr161844 X 109095415 to 109095426 11 + TSS region transcription start site region 161844
Tssr161845 X 109095447 to 109095476 29 + TSS region transcription start site region 161845
Tssr161846 X 109095481 to 109095522 41 + TSS region transcription start site region 161846
Tssr161847 X 109095539 to 109095554 15 + TSS region transcription start site region 161847
Tssr161848 X 109107018 to 109107021 3 + TSS region transcription start site region 161848