Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:106707587-108377595

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5127 X 106583186 to 106710557 127371 + protein coding gene predicted gene 5127
Gm14882 X 106755333 to 106755550 217 + pseudogene predicted gene 14882
Gm14881 X 106755736 to 106756141 405 + pseudogene predicted gene 14881
Gm14880 X 106821940 to 106822231 291 + pseudogene predicted gene 14880
DXMit84 X 106834205 to 106834402 197 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 84
Rtl3 X 106837082 to 106840643 3561 - protein coding gene retrotransposon Gag like 3
Tssr164038 X 106840530 to 106840554 24 - TSS region transcription start site region 164038
Tssr164039 X 106840572 to 106840581 9 - TSS region transcription start site region 164039
Tssr161801 X 106920599 to 106920613 14 + TSS region transcription start site region 161801
Tssr161802 X 106920618 to 106920632 14 + TSS region transcription start site region 161802
Lpar4 X 106920625 to 106933899 13274 + protein coding gene lysophosphatidic acid receptor 4
Tssr161803 X 106920643 to 106920699 56 + TSS region transcription start site region 161803
Tssr161804 X 106920756 to 106920786 30 + TSS region transcription start site region 161804
Tssr161805 X 107088452 to 107088466 14 + TSS region transcription start site region 161805
P2ry10 X 107088492 to 107104974 16482 + protein coding gene purinergic receptor P2Y, G-protein coupled 10
Tssr161806 X 107089311 to 107089337 26 + TSS region transcription start site region 161806
Tssr161807 X 107089342 to 107089383 41 + TSS region transcription start site region 161807
Tssr161808 X 107089386 to 107089409 23 + TSS region transcription start site region 161808
Tssr161809 X 107089632 to 107089641 9 + TSS region transcription start site region 161809
Tssr161810 X 107089642 to 107089656 14 + TSS region transcription start site region 161810
Tssr161811 X 107089664 to 107089680 16 + TSS region transcription start site region 161811
Tssr161812 X 107089689 to 107089699 10 + TSS region transcription start site region 161812
Tssr161813 X 107148904 to 107148963 59 + TSS region transcription start site region 161813
P2ry10b X 107148927 to 107173661 24734 + protein coding gene purinergic receptor P2Y, G-protein coupled 10B
Tssr161814 X 107148969 to 107148980 11 + TSS region transcription start site region 161814
Tssr161815 X 107148986 to 107149006 20 + TSS region transcription start site region 161815
Tssr161816 X 107149021 to 107149030 9 + TSS region transcription start site region 161816
Tssr161817 X 107149032 to 107149051 19 + TSS region transcription start site region 161817
Tssr161818 X 107149060 to 107149072 12 + TSS region transcription start site region 161818
Tssr161819 X 107149464 to 107149500 36 + TSS region transcription start site region 161819
Tssr161820 X 107149580 to 107149605 25 + TSS region transcription start site region 161820
Tssr5671 X 107149645 to 107149656 11 + TSS region transcription start site region 5671
Tssr161821 X 107172294 to 107172298 4 + TSS region transcription start site region 161821
Gm14834 X 107174760 to 107175472 712 - pseudogene predicted gene 14834
Gm14836 X 107233330 to 107233800 470 + pseudogene predicted gene 14836
Tssr161822 X 107255704 to 107255714 10 + TSS region transcription start site region 161822
Tssr161823 X 107255772 to 107255782 10 + TSS region transcription start site region 161823
Gpr174 X 107255878 to 107296769 40891 + protein coding gene G protein-coupled receptor 174
Tssr161824 X 107256031 to 107256064 33 + TSS region transcription start site region 161824
Tssr161825 X 107256066 to 107256087 21 + TSS region transcription start site region 161825
Tssr161826 X 107256156 to 107256167 11 + TSS region transcription start site region 161826
Tssr161827 X 107256172 to 107256173 1 + TSS region transcription start site region 161827
Gm9208 X 107279015 to 107279962 947 - pseudogene predicted gene 9208
Gm14833 X 107344586 to 107345612 1026 + pseudogene predicted gene 14833
Gm5392 X 107354806 to 107355434 628 - pseudogene predicted gene 5392
Itm2a X 107397195 to 107403360 6165 - protein coding gene integral membrane protein 2A
Tssr164040 X 107397315 to 107397326 11 - TSS region transcription start site region 164040
Tssr161828 X 107397727 to 107397758 31 + TSS region transcription start site region 161828
Cpgi22911 X 107402926 to 107403314 388 CpG island CpG island 22911
Tssr164041 X 107403295 to 107403404 109 - TSS region transcription start site region 164041
Tssr164042 X 107403631 to 107403651 20 - TSS region transcription start site region 164042
Gm14835 X 107405894 to 107406208 314 - pseudogene predicted gene 14835
Tssr161829 X 107542565 to 107542577 12 + TSS region transcription start site region 161829
4933401B06Rik X 107542582 to 107543800 1218 + pseudogene RIKEN cDNA 4933401B06 gene
Tssr161830 X 107542587 to 107542595 8 + TSS region transcription start site region 161830
Cpgi22912 X 107589587 to 107590120 533 CpG island CpG island 22912
Tssr161831 X 107667956 to 107667985 29 + TSS region transcription start site region 161831
Tbx22 X 107667964 to 107688978 21014 + protein coding gene T-box 22
Tssr161832 X 107676837 to 107676857 20 + TSS region transcription start site region 161832
2610002M06Rik X 107782751 to 107816334 33583 - protein coding gene RIKEN cDNA 2610002M06 gene
Tssr161833 X 107792583 to 107792609 26 + TSS region transcription start site region 161833
Tent5d X 107792590 to 107872909 80319 + protein coding gene terminal nucleotidyltransferase 5D
Cpgi22913 X 107816145 to 107816582 437 CpG island CpG island 22913
Tssr164043 X 107816238 to 107816337 99 - TSS region transcription start site region 164043
Tssr164044 X 107816379 to 107816402 23 - TSS region transcription start site region 164044
Tssr161834 X 107816500 to 107816520 20 + TSS region transcription start site region 161834
Gm732 X 107945735 to 107948436 2701 - protein coding gene predicted gene 732
Tssr164045 X 107948432 to 107948443 11 - TSS region transcription start site region 164045
Tssr161835 X 108056224 to 108056229 5 + TSS region transcription start site region 161835
Gm14849 X 108060304 to 108062619 2315 + pseudogene predicted gene 14849
Tssr161836 X 108109976 to 108109978 2 + TSS region transcription start site region 161836