Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:106431940-107212231

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fndc3c1 X 106420041 to 106485401 65360 - protein coding gene fibronectin type III domain containing 3C1
Tssr164027 X 106485137 to 106485164 27 - TSS region transcription start site region 164027
Tssr164028 X 106485168 to 106485187 19 - TSS region transcription start site region 164028
Cpgi22910 X 106485171 to 106485579 408 CpG island CpG island 22910
Tssr164029 X 106485191 to 106485212 21 - TSS region transcription start site region 164029
Tssr164030 X 106485214 to 106485259 45 - TSS region transcription start site region 164030
Tssr164031 X 106485367 to 106485424 57 - TSS region transcription start site region 164031
Cysltr1 X 106576509 to 106603679 27170 - protein coding gene cysteinyl leukotriene receptor 1
Tssr161796 X 106583184 to 106583187 3 + TSS region transcription start site region 161796
Gm5127 X 106583186 to 106710557 127371 + protein coding gene predicted gene 5127
Gm24622 X 106587481 to 106587642 161 - snRNA gene predicted gene, 24622
Tssr164032 X 106603456 to 106603485 29 - TSS region transcription start site region 164032
Tssr164033 X 106603538 to 106603551 13 - TSS region transcription start site region 164033
Tssr164034 X 106603600 to 106603617 17 - TSS region transcription start site region 164034
Tssr164035 X 106603620 to 106603631 11 - TSS region transcription start site region 164035
Tssr164036 X 106603677 to 106603702 25 - TSS region transcription start site region 164036
Tssr164037 X 106603709 to 106603718 9 - TSS region transcription start site region 164037
Gm14877 X 106611903 to 106612775 872 + pseudogene predicted gene 14877
Gm14878 X 106612101 to 106612393 292 + pseudogene predicted gene 14878
Gm14879 X 106632797 to 106633303 506 - pseudogene predicted gene 14879
Gm9200 X 106641381 to 106642734 1353 - pseudogene predicted gene 9200
Gm24491 X 106649913 to 106650019 106 - snRNA gene predicted gene, 24491
Gm22102 X 106697078 to 106697198 120 + miRNA gene predicted gene, 22102
Tssr161797 X 106703845 to 106703865 20 + TSS region transcription start site region 161797
Tssr161798 X 106703866 to 106703897 31 + TSS region transcription start site region 161798
Tssr161799 X 106703905 to 106703916 11 + TSS region transcription start site region 161799
Tssr161800 X 106703964 to 106703975 11 + TSS region transcription start site region 161800
Gm14882 X 106755333 to 106755550 217 + pseudogene predicted gene 14882
Gm14881 X 106755736 to 106756141 405 + pseudogene predicted gene 14881
Gm14880 X 106821940 to 106822231 291 + pseudogene predicted gene 14880
DXMit84 X 106834205 to 106834402 197 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 84
Rtl3 X 106837082 to 106840643 3561 - protein coding gene retrotransposon Gag like 3
Tssr164038 X 106840530 to 106840554 24 - TSS region transcription start site region 164038
Tssr164039 X 106840572 to 106840581 9 - TSS region transcription start site region 164039
Tssr161801 X 106920599 to 106920613 14 + TSS region transcription start site region 161801
Tssr161802 X 106920618 to 106920632 14 + TSS region transcription start site region 161802
Lpar4 X 106920625 to 106933899 13274 + protein coding gene lysophosphatidic acid receptor 4
Tssr161803 X 106920643 to 106920699 56 + TSS region transcription start site region 161803
Tssr161804 X 106920756 to 106920786 30 + TSS region transcription start site region 161804
Tssr161805 X 107088452 to 107088466 14 + TSS region transcription start site region 161805
P2ry10 X 107088492 to 107104974 16482 + protein coding gene purinergic receptor P2Y, G-protein coupled 10
Tssr161806 X 107089311 to 107089337 26 + TSS region transcription start site region 161806
Tssr161807 X 107089342 to 107089383 41 + TSS region transcription start site region 161807
Tssr161808 X 107089386 to 107089409 23 + TSS region transcription start site region 161808
Tssr161809 X 107089632 to 107089641 9 + TSS region transcription start site region 161809
Tssr161810 X 107089642 to 107089656 14 + TSS region transcription start site region 161810
Tssr161811 X 107089664 to 107089680 16 + TSS region transcription start site region 161811
Tssr161812 X 107089689 to 107089699 10 + TSS region transcription start site region 161812
Tssr161813 X 107148904 to 107148963 59 + TSS region transcription start site region 161813
P2ry10b X 107148927 to 107173661 24734 + protein coding gene purinergic receptor P2Y, G-protein coupled 10B
Tssr161814 X 107148969 to 107148980 11 + TSS region transcription start site region 161814
Tssr161815 X 107148986 to 107149006 20 + TSS region transcription start site region 161815
Tssr161816 X 107149021 to 107149030 9 + TSS region transcription start site region 161816
Tssr161817 X 107149032 to 107149051 19 + TSS region transcription start site region 161817
Tssr161818 X 107149060 to 107149072 12 + TSS region transcription start site region 161818
Tssr161819 X 107149464 to 107149500 36 + TSS region transcription start site region 161819
Tssr161820 X 107149580 to 107149605 25 + TSS region transcription start site region 161820
Tssr5671 X 107149645 to 107149656 11 + TSS region transcription start site region 5671
Tssr161821 X 107172294 to 107172298 4 + TSS region transcription start site region 161821
Gm14834 X 107174760 to 107175472 712 - pseudogene predicted gene 14834