Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:106129630-106309658

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr161779 X 106135244 to 106135254 10 + TSS region transcription start site region 161779
Tssr161780 X 106137086 to 106137097 11 + TSS region transcription start site region 161780
Tssr164019 X 106143063 to 106143069 6 - TSS region transcription start site region 164019
Tssr161781 X 106143199 to 106143214 15 + TSS region transcription start site region 161781
Tssr161782 X 106143243 to 106143302 59 + TSS region transcription start site region 161782
Tlr13 X 106143275 to 106160493 17218 + protein coding gene toll-like receptor 13
Tssr161783 X 106143685 to 106143694 9 + TSS region transcription start site region 161783
Tssr161784 X 106143872 to 106143877 5 + TSS region transcription start site region 161784
Tssr161785 X 106146642 to 106146652 10 + TSS region transcription start site region 161785
Tssr161786 X 106149660 to 106149668 8 + TSS region transcription start site region 161786
Tssr161787 X 106156743 to 106156755 12 + TSS region transcription start site region 161787
Tssr161788 X 106156785 to 106156809 24 + TSS region transcription start site region 161788
Tssr161789 X 106156829 to 106156847 18 + TSS region transcription start site region 161789
Tssr161790 X 106156849 to 106156876 27 + TSS region transcription start site region 161790
Tssr161791 X 106157099 to 106157111 12 + TSS region transcription start site region 161791
Tssr161792 X 106157434 to 106157449 15 + TSS region transcription start site region 161792
Gm14856 X 106176314 to 106176926 612 + pseudogene predicted gene 14856
DXMit64 X 106185674 to 106185804 130 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 64
DXMit64.2 X 106185775 to 106185984 209 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 64.2
Cpgi22908 X 106186801 to 106187351 550 CpG island CpG island 22908
Tssr5669 X 106186928 to 106186935 7 + TSS region transcription start site region 5669
Pgk1 X 106187100 to 106203699 16599 + protein coding gene phosphoglycerate kinase 1
Tssr161793 X 106187137 to 106187179 42 + TSS region transcription start site region 161793
Tssr161794 X 106187200 to 106187212 12 + TSS region transcription start site region 161794
Tssr161795 X 106188005 to 106188023 18 + TSS region transcription start site region 161795
Taf9b X 106206883 to 106221158 14275 - protein coding gene TATA-box binding protein associated factor 9B
Tssr164020 X 106208087 to 106208109 22 - TSS region transcription start site region 164020
Cpgi22909 X 106219276 to 106220048 772 CpG island CpG island 22909
Tssr164021 X 106219630 to 106219658 28 - TSS region transcription start site region 164021
Tssr164022 X 106219682 to 106219693 11 - TSS region transcription start site region 164022
Tssr164023 X 106221145 to 106221169 24 - TSS region transcription start site region 164023
Fnd3c2 X 106235246 to 106255372 20126 - protein coding gene fibronectin type III domain containing 3C2
Tssr5670 X 106254197 to 106254198 1 + TSS region transcription start site region 5670
Tssr164024 X 106255367 to 106255376 9 - TSS region transcription start site region 164024
Gm14852 X 106271205 to 106272982 1777 - pseudogene predicted gene 14852
Gm14857 X 106281915 to 106285096 3181 - pseudogene predicted gene 14857
Gm5133 X 106306381 to 106309725 3344 - pseudogene predicted pseudogene 5133