Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:105375541-105935544

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5330434G04Rik X 105372994 to 105391754 18760 - lincRNA gene RIKEN cDNA 5330434G04 gene
Mir325 X 105379082 to 105379179 97 - miRNA gene microRNA 325
Tssr163996 X 105391726 to 105391762 36 - TSS region transcription start site region 163996
Tssr163997 X 105391770 to 105391781 11 - TSS region transcription start site region 163997
Rab9b-ps1 X 105482098 to 105482703 605 + pseudogene RAB9B, member RAS oncogene family, pseudogene 1
Tssr161752 X 105499768 to 105499773 5 + TSS region transcription start site region 161752
Cypt2 X 105499772 to 105500639 867 + protein coding gene cysteine-rich perinuclear theca 2
Gm14823 X 105567901 to 105568138 237 - pseudogene predicted gene 14823
Tssr5668 X 105655541 to 105655544 3 + TSS region transcription start site region 5668
Gm14855 X 105688024 to 105688215 191 + pseudogene predicted gene 14855
Gm14854 X 105706966 to 105707806 840 + pseudogene predicted gene 14854
Gm7117 X 105725128 to 105725514 386 - pseudogene predicted pseudogene 7117
Cpgi22903 X 105763890 to 105764228 338 CpG island CpG island 22903
Cpgi22904 X 105764232 to 105765314 1082 CpG island CpG island 22904
Tssr161753 X 105764262 to 105764267 5 + TSS region transcription start site region 161753
Fgf16 X 105764279 to 105774939 10660 + protein coding gene fibroblast growth factor 16
Atrx X 105797615 to 105929403 131788 - protein coding gene ATRX, chromatin remodeler
Gm26020 X 105819883 to 105820065 182 + snRNA gene predicted gene, 26020
Gm14853 X 105844465 to 105845013 548 - pseudogene predicted gene 14853
Tssr163998 X 105845925 to 105845943 18 - TSS region transcription start site region 163998
Tssr163999 X 105849074 to 105849075 1 - TSS region transcription start site region 163999
Tssr164000 X 105855908 to 105855922 14 - TSS region transcription start site region 164000
Tssr164001 X 105855944 to 105855967 23 - TSS region transcription start site region 164001
Tssr164002 X 105856549 to 105856566 17 - TSS region transcription start site region 164002
DXMit213 X 105864610 to 105864721 111 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 213
Tssr164003 X 105867907 to 105867925 18 - TSS region transcription start site region 164003
Gm23656 X 105873824 to 105873935 111 + snRNA gene predicted gene, 23656
DXErtd223e X 105873855 to 105874067 212 DNA segment DNA segment, Chr X, ERATO Doi 223, expressed
Tssr164004 X 105875068 to 105875087 19 - TSS region transcription start site region 164004
Tssr164005 X 105875407 to 105875425 18 - TSS region transcription start site region 164005
Tssr164006 X 105875471 to 105875493 22 - TSS region transcription start site region 164006
Tssr164007 X 105875500 to 105875517 17 - TSS region transcription start site region 164007
Tssr164008 X 105875621 to 105875634 13 - TSS region transcription start site region 164008
Tssr164009 X 105876026 to 105876040 14 - TSS region transcription start site region 164009
E030036C24Rik X 105897558 to 105898875 1317 unclassified gene RIKEN cDNA E030036C24 gene
Cpgi22905 X 105928293 to 105929460 1167 CpG island CpG island 22905
Tssr164010 X 105928539 to 105928542 3 - TSS region transcription start site region 164010
Tssr164011 X 105928547 to 105928583 36 - TSS region transcription start site region 164011
Tssr164012 X 105929304 to 105929321 17 - TSS region transcription start site region 164012
Tssr164013 X 105929333 to 105929382 49 - TSS region transcription start site region 164013
Tssr164014 X 105929397 to 105929408 11 - TSS region transcription start site region 164014