Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:105159772-105840639

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E530001F21Rik X 105164632 to 105165361 729 - pseudogene RIKEN cDNA E530001F21 gene
Tssr5667 X 105166687 to 105166691 4 + TSS region transcription start site region 5667
Gm39531 X 105176119 to 105257485 81366 - lncRNA gene predicted gene, 39531
Rpl30-ps9 X 105278637 to 105278981 344 - pseudogene ribosomal protein L30, pseudogene 9
Tssr163993 X 105279046 to 105279057 11 - TSS region transcription start site region 163993
Tssr163994 X 105307988 to 105308005 17 - TSS region transcription start site region 163994
Gm14824 X 105327739 to 105328475 736 - pseudogene predicted gene 14824
Mir384 X 105344282 to 105344369 87 - miRNA gene microRNA 384
5330434G04Rik X 105372994 to 105391754 18760 - lincRNA gene RIKEN cDNA 5330434G04 gene
Tssr163995 X 105374808 to 105374813 5 - TSS region transcription start site region 163995
Mir325 X 105379082 to 105379179 97 - miRNA gene microRNA 325
Tssr163996 X 105391726 to 105391762 36 - TSS region transcription start site region 163996
Tssr163997 X 105391770 to 105391781 11 - TSS region transcription start site region 163997
Rab9b-ps1 X 105482098 to 105482703 605 + pseudogene RAB9B, member RAS oncogene family, pseudogene 1
Tssr161752 X 105499768 to 105499773 5 + TSS region transcription start site region 161752
Cypt2 X 105499772 to 105500639 867 + protein coding gene cysteine-rich perinuclear theca 2
Gm14823 X 105567901 to 105568138 237 - pseudogene predicted gene 14823
Tssr5668 X 105655541 to 105655544 3 + TSS region transcription start site region 5668
Gm14855 X 105688024 to 105688215 191 + pseudogene predicted gene 14855
Gm14854 X 105706966 to 105707806 840 + pseudogene predicted gene 14854
Gm7117 X 105725128 to 105725514 386 - pseudogene predicted pseudogene 7117
Cpgi22903 X 105763890 to 105764228 338 CpG island CpG island 22903
Cpgi22904 X 105764232 to 105765314 1082 CpG island CpG island 22904
Tssr161753 X 105764262 to 105764267 5 + TSS region transcription start site region 161753
Fgf16 X 105764279 to 105774939 10660 + protein coding gene fibroblast growth factor 16
Atrx X 105797615 to 105929403 131788 - protein coding gene ATRX, chromatin remodeler
Gm26020 X 105819883 to 105820065 182 + snRNA gene predicted gene, 26020