Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:104211865-105021971

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcb7 X 104280657 to 104413856 133199 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 7
Vcp-rs X 104345829 to 104348234 2405 - pseudogene valosin containing protein, related sequence
Tssr163980 X 104348481 to 104348499 18 - TSS region transcription start site region 163980
Gm6238 X 104382042 to 104382506 464 - pseudogene predicted pseudogene 6238
Tssr163981 X 104382641 to 104382651 10 - TSS region transcription start site region 163981
Cpgi22896 X 104413382 to 104413981 599 CpG island CpG island 22896
Tssr163982 X 104413825 to 104413856 31 - TSS region transcription start site region 163982
Tssr163983 X 104413862 to 104413871 9 - TSS region transcription start site region 163983
Cpgi22897 X 104482738 to 104483264 526 CpG island CpG island 22897
Tssr161735 X 104482774 to 104482858 84 + TSS region transcription start site region 161735
Uprt X 104482782 to 104506262 23480 + protein coding gene uracil phosphoribosyltransferase
Tssr161736 X 104483121 to 104483157 36 + TSS region transcription start site region 161736
Tssr161737 X 104483162 to 104483193 31 + TSS region transcription start site region 161737
Tssr161738 X 104489035 to 104489039 4 + TSS region transcription start site region 161738
Tssr161739 X 104506682 to 104506699 17 + TSS region transcription start site region 161739
D830012I24Rik X 104508411 to 104512226 3815 unclassified non-coding RNA gene RIKEN cDNA D830012I24 gene
Tssr161740 X 104508903 to 104508917 14 + TSS region transcription start site region 161740
Gm17963 X 104515985 to 104516567 582 + pseudogene predicted gene, 17963
Zdhhc15 X 104536969 to 104671064 134095 - protein coding gene zinc finger, DHHC domain containing 15
Vcfq1 X 104611487 to 104611487 0 QTL vasocontractile function QTL 1
Gm22430 X 104616865 to 104616971 106 + snoRNA gene predicted gene, 22430
Gm39530 X 104667419 to 104719612 52193 + lncRNA gene predicted gene, 39530
Cpgi22898 X 104670606 to 104671073 467 CpG island CpG island 22898
Tssr163984 X 104670786 to 104670832 46 - TSS region transcription start site region 163984
Tssr5666 X 104670843 to 104670858 15 - TSS region transcription start site region 5666
Tssr163985 X 104670955 to 104670978 23 - TSS region transcription start site region 163985
Tssr163986 X 104670984 to 104671013 29 - TSS region transcription start site region 163986
Tssr163987 X 104671014 to 104671034 20 - TSS region transcription start site region 163987
Tssr163988 X 104671048 to 104671071 23 - TSS region transcription start site region 163988
Gm14822 X 104746482 to 104746772 290 + pseudogene predicted gene 14822
1700121L16Rik X 104816776 to 104842455 25679 + lincRNA gene RIKEN cDNA 1700121L16 gene
DXMit177 X 104835315 to 104835438 123 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 177
Magee2 X 104854952 to 104857267 2315 - protein coding gene melanoma antigen, family E, 2
Cpgi22899 X 104856785 to 104857321 536 CpG island CpG island 22899
Tssr163989 X 104857206 to 104857220 14 - TSS region transcription start site region 163989
Tssr163990 X 104857228 to 104857282 54 - TSS region transcription start site region 163990
Tssr161741 X 104947694 to 104947696 2 + TSS region transcription start site region 161741
Gm6285 X 104947785 to 104948282 497 + pseudogene predicted gene 6285
Gm33486 X 105001441 to 105003896 2455 - lncRNA gene predicted gene, 33486
DXMit245 X 105018710 to 105018795 85 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-245
Gm22090 X 105020268 to 105020378 110 - snRNA gene predicted gene, 22090