Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:104078481-104618499

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nexmif X 104077434 to 104201185 123751 - protein coding gene neurite extension and migration factor
DXMit158 X 104115942 to 104116072 130 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 158
Mir672 X 104116175 to 104116274 99 - miRNA gene microRNA 672
DXMit40 X 104146767 to 104146882 115 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 40
Cpgi22895 X 104199604 to 104201526 1922 CpG island CpG island 22895
Tssr161734 X 104200845 to 104200847 2 + TSS region transcription start site region 161734
Tssr163977 X 104201099 to 104201117 18 - TSS region transcription start site region 163977
Tssr163978 X 104201126 to 104201166 40 - TSS region transcription start site region 163978
Tssr163979 X 104201178 to 104201205 27 - TSS region transcription start site region 163979
Abcb7 X 104280657 to 104413856 133199 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 7
Vcp-rs X 104345829 to 104348234 2405 - pseudogene valosin containing protein, related sequence
Tssr163980 X 104348481 to 104348499 18 - TSS region transcription start site region 163980
Gm6238 X 104382042 to 104382506 464 - pseudogene predicted pseudogene 6238
Tssr163981 X 104382641 to 104382651 10 - TSS region transcription start site region 163981
Cpgi22896 X 104413382 to 104413981 599 CpG island CpG island 22896
Tssr163982 X 104413825 to 104413856 31 - TSS region transcription start site region 163982
Tssr163983 X 104413862 to 104413871 9 - TSS region transcription start site region 163983
Cpgi22897 X 104482738 to 104483264 526 CpG island CpG island 22897
Tssr161735 X 104482774 to 104482858 84 + TSS region transcription start site region 161735
Uprt X 104482782 to 104506262 23480 + protein coding gene uracil phosphoribosyltransferase
Tssr161736 X 104483121 to 104483157 36 + TSS region transcription start site region 161736
Tssr161737 X 104483162 to 104483193 31 + TSS region transcription start site region 161737
Tssr161738 X 104489035 to 104489039 4 + TSS region transcription start site region 161738
Tssr161739 X 104506682 to 104506699 17 + TSS region transcription start site region 161739
D830012I24Rik X 104508411 to 104512226 3815 unclassified non-coding RNA gene RIKEN cDNA D830012I24 gene
Tssr161740 X 104508903 to 104508917 14 + TSS region transcription start site region 161740
Gm17963 X 104515985 to 104516567 582 + pseudogene predicted gene, 17963
Zdhhc15 X 104536969 to 104671064 134095 - protein coding gene zinc finger, DHHC domain containing 15
Vcfq1 X 104611487 to 104611487 0 QTL vasocontractile function QTL 1
Gm22430 X 104616865 to 104616971 106 + snoRNA gene predicted gene, 22430