Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:103981099-104421117

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rlim X 103957163 to 103981284 24121 - protein coding gene ring finger protein, LIM domain interacting
Cpgi22894 X 103980653 to 103981402 749 CpG island CpG island 22894
Tssr163973 X 103981134 to 103981148 14 - TSS region transcription start site region 163973
Tssr163974 X 103981168 to 103981181 13 - TSS region transcription start site region 163974
Tssr163975 X 103981229 to 103981238 9 - TSS region transcription start site region 163975
Tssr163976 X 103981242 to 103981287 45 - TSS region transcription start site region 163976
Gm14892 X 104001066 to 104001337 271 - pseudogene predicted gene 14892
Gm23378 X 104001373 to 104001479 106 - snRNA gene predicted gene, 23378
Tssr161733 X 104017406 to 104017410 4 + TSS region transcription start site region 161733
Tssr5665 X 104040541 to 104040544 3 + TSS region transcription start site region 5665
Gm22266 X 104070189 to 104070326 137 - snoRNA gene predicted gene, 22266
Gm24993 X 104076971 to 104077061 90 + miRNA gene predicted gene, 24993
Nexmif X 104077434 to 104201185 123751 - protein coding gene neurite extension and migration factor
DXMit158 X 104115942 to 104116072 130 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 158
Mir672 X 104116175 to 104116274 99 - miRNA gene microRNA 672
DXMit40 X 104146767 to 104146882 115 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 40
Cpgi22895 X 104199604 to 104201526 1922 CpG island CpG island 22895
Tssr161734 X 104200845 to 104200847 2 + TSS region transcription start site region 161734
Tssr163977 X 104201099 to 104201117 18 - TSS region transcription start site region 163977
Tssr163978 X 104201126 to 104201166 40 - TSS region transcription start site region 163978
Tssr163979 X 104201178 to 104201205 27 - TSS region transcription start site region 163979
Abcb7 X 104280657 to 104413856 133199 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 7
Vcp-rs X 104345829 to 104348234 2405 - pseudogene valosin containing protein, related sequence
Tssr163980 X 104348481 to 104348499 18 - TSS region transcription start site region 163980
Gm6238 X 104382042 to 104382506 464 - pseudogene predicted pseudogene 6238
Tssr163981 X 104382641 to 104382651 10 - TSS region transcription start site region 163981
Cpgi22896 X 104413382 to 104413981 599 CpG island CpG island 22896
Tssr163982 X 104413825 to 104413856 31 - TSS region transcription start site region 163982
Tssr163983 X 104413862 to 104413871 9 - TSS region transcription start site region 163983