Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:103502921-103643154

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jpx X 103493558 to 103506425 12867 + lincRNA gene Jpx transcript, Xist activator (non-protein coding)
Gm9670 X 103506812 to 103507589 777 + pseudogene predicted gene 9670
Gm14860 X 103514922 to 103515350 428 + pseudogene predicted gene 14860
Gm9785 X 103525319 to 103525847 528 - pseudogene predicted pseudogene 9785
Gm9157 X 103529483 to 103529707 224 + pseudogene predicted gene 9157
Ftx X 103560910 to 103623754 62844 - lincRNA gene Ftx transcript, Xist regulator (non-protein coding)
Mir421 X 103572921 to 103572996 75 - miRNA gene microRNA 421
Mirc23 X 103572921 to 103573154 233 complex/cluster/region microRNA cluster 23, including Mir374b through Mir421
Mir374b X 103573060 to 103573154 94 - miRNA gene microRNA 374b
Mir374c X 103573085 to 103573133 48 + miRNA gene microRNA 374c
Gm38020 X 103576426 to 103581101 4675 - unclassified gene predicted gene, 38020
Gm27798 X 103595938 to 103596008 70 + unclassified non-coding RNA gene predicted gene, 27798
DXPas31 X 103597150 to 103597316 166 DNA segment DNA segment, Chr X, Pasteur Institute 31
Gm9159 X 103597771 to 103598336 565 + pseudogene predicted gene 9159
Gm27987 X 103605225 to 103605317 92 + unclassified non-coding RNA gene predicted gene, 27987
Tssr163961 X 103605595 to 103605635 40 - TSS region transcription start site region 163961
Gm27285 X 103606323 to 103606449 126 + unclassified non-coding RNA gene predicted gene, 27285
Tssr163962 X 103616783 to 103616818 35 - TSS region transcription start site region 163962
Cpgi22889 X 103616807 to 103617108 301 CpG island CpG island 22889
Cpgi22890 X 103622325 to 103622677 352 CpG island CpG island 22890
Cpgi22891 X 103623544 to 103623865 321 CpG island CpG island 22891
Gm27321 X 103623551 to 103623755 204 + lncRNA gene predicted gene, 27321
Tssr163963 X 103623648 to 103623672 24 - TSS region transcription start site region 163963
Tssr163964 X 103623704 to 103623762 58 - TSS region transcription start site region 163964
Tssr161729 X 103630575 to 103630597 22 + TSS region transcription start site region 161729
Zcchc13 X 103630586 to 103631664 1078 + protein coding gene zinc finger, CCHC domain containing 13
Tssr161730 X 103630600 to 103630614 14 + TSS region transcription start site region 161730
DXNds3 X 103637152 to 103637260 108 DNA segment DNA segment, Chr X, Nuffield Department of Surgery 3
DXMit18 X 103637247 to 103637392 145 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 18