Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:103383351-103473399

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chic1 X 103356476 to 103396092 39616 + protein coding gene cysteine-rich hydrophobic domain 1
DXPas41 X 103385427 to 103385591 164 DNA segment DNA segment, Chr X, Pasteur Institute 41
DXPas40 X 103385843 to 103385952 109 DNA segment DNA segment, Chr X, Pasteur Institute 40
DXPas39 X 103396269 to 103396522 253 DNA segment DNA segment, Chr X, Pasteur Institute 39
DXPas38 X 103403127 to 103403307 180 DNA segment DNA segment, Chr X, Pasteur Institute 38
Tssr161720 X 103414461 to 103414481 20 + TSS region transcription start site region 161720
Tsx X 103414467 to 103424580 10113 + protein coding gene testis specific X-linked gene
Gm26992 X 103422010 to 103481705 59695 + protein coding gene predicted gene, 26992
DXPas42 X 103424261 to 103424465 204 DNA segment DNA segment, Chr X, Pasteur Institute 42
Tssr163936 X 103428351 to 103428399 48 - TSS region transcription start site region 163936
DXPas29 X 103431419 to 103431580 161 DNA segment DNA segment, Chr X, Pasteur Institute 29
Tsix X 103431517 to 103484957 53440 + antisense lncRNA gene X (inactive)-specific transcript, opposite strand
Tssr163937 X 103438237 to 103438242 5 - TSS region transcription start site region 163937
Cpgi22886 X 103447609 to 103448255 646 CpG island CpG island 22886
Tssr161721 X 103447712 to 103447735 23 + TSS region transcription start site region 161721
Tssr161722 X 103447742 to 103447758 16 + TSS region transcription start site region 161722
Tssr161723 X 103447785 to 103447796 11 + TSS region transcription start site region 161723
DXPas36 X 103451410 to 103451618 208 DNA segment DNA segment, Chr X, Pastuer Institute 36
DXPas37 X 103452612 to 103452814 202 DNA segment DNA segment, Chr X, Pasteur Institute 37
Xist X 103460373 to 103483233 22860 - lincRNA gene inactive X specific transcripts
Tssr163938 X 103460403 to 103460429 26 - TSS region transcription start site region 163938
Gm27733 X 103461218 to 103461285 67 - unclassified non-coding RNA gene predicted gene, 27733
Tssr5663 X 103466615 to 103466632 17 - TSS region transcription start site region 5663
Tssr163939 X 103467289 to 103467338 49 - TSS region transcription start site region 163939
Tssr163940 X 103467454 to 103467554 100 - TSS region transcription start site region 163940
Tssr163941 X 103468012 to 103468036 24 - TSS region transcription start site region 163941
Tssr163942 X 103468913 to 103468927 14 - TSS region transcription start site region 163942
Gm27927 X 103469671 to 103469796 125 - unclassified non-coding RNA gene predicted gene, 27927
Tssr163943 X 103469695 to 103469707 12 - TSS region transcription start site region 163943
Tssr163944 X 103469728 to 103469741 13 - TSS region transcription start site region 163944
Tssr163945 X 103472998 to 103473002 4 - TSS region transcription start site region 163945