Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:103196398-103455224

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930519F16Rik X 103182991 to 103256632 73641 - pseudogene RIKEN cDNA 4930519F16 gene
Gm9050 X 103227705 to 103228152 447 + pseudogene predicted gene 9050
Gm14847 X 103236125 to 103236643 518 + pseudogene predicted gene 14847
Tssr163933 X 103256597 to 103256608 11 - TSS region transcription start site region 163933
Gm19200 X 103287167 to 103288970 1803 - pseudogene predicted gene, 19200
Gm14848 X 103299110 to 103299974 864 + pseudogene predicted gene 14848
DXPas28 X 103307156 to 103307309 153 DNA segment DNA segment, Chr X, Pasteur Institute 28
Tssr163934 X 103311777 to 103311802 25 - TSS region transcription start site region 163934
Tssr163935 X 103311818 to 103311837 19 - TSS region transcription start site region 163935
Gm3931 X 103319111 to 103319565 454 + pseudogene predicted gene 3931
Cdx4 X 103321398 to 103330224 8826 + protein coding gene caudal type homeobox 4
Cpgi22884 X 103321842 to 103322173 331 CpG island CpG island 22884
Gm9516 X 103336830 to 103337253 423 + pseudogene predicted gene 9516
Cpgi22885 X 103356341 to 103356984 643 CpG island CpG island 22885
Tssr161716 X 103356420 to 103356433 13 + TSS region transcription start site region 161716
Tssr161717 X 103356464 to 103356488 24 + TSS region transcription start site region 161717
Chic1 X 103356476 to 103396092 39616 + protein coding gene cysteine-rich hydrophobic domain 1
Tssr161718 X 103356491 to 103356513 22 + TSS region transcription start site region 161718
Tssr161719 X 103356574 to 103356602 28 + TSS region transcription start site region 161719
Gm26952 X 103381957 to 103383169 1212 - antisense lncRNA gene predicted gene, 26952
DXPas41 X 103385427 to 103385591 164 DNA segment DNA segment, Chr X, Pasteur Institute 41
DXPas40 X 103385843 to 103385952 109 DNA segment DNA segment, Chr X, Pasteur Institute 40
DXPas39 X 103396269 to 103396522 253 DNA segment DNA segment, Chr X, Pasteur Institute 39
DXPas38 X 103403127 to 103403307 180 DNA segment DNA segment, Chr X, Pasteur Institute 38
Tssr161720 X 103414461 to 103414481 20 + TSS region transcription start site region 161720
Tsx X 103414467 to 103424580 10113 + protein coding gene testis specific X-linked gene
Gm26992 X 103422010 to 103481705 59695 + protein coding gene predicted gene, 26992
DXPas42 X 103424261 to 103424465 204 DNA segment DNA segment, Chr X, Pasteur Institute 42
Tssr163936 X 103428351 to 103428399 48 - TSS region transcription start site region 163936
DXPas29 X 103431419 to 103431580 161 DNA segment DNA segment, Chr X, Pasteur Institute 29
Tsix X 103431517 to 103484957 53440 + antisense lncRNA gene X (inactive)-specific transcript, opposite strand
Tssr163937 X 103438237 to 103438242 5 - TSS region transcription start site region 163937
Cpgi22886 X 103447609 to 103448255 646 CpG island CpG island 22886
Tssr161721 X 103447712 to 103447735 23 + TSS region transcription start site region 161721
Tssr161722 X 103447742 to 103447758 16 + TSS region transcription start site region 161722
Tssr161723 X 103447785 to 103447796 11 + TSS region transcription start site region 161723
DXPas36 X 103451410 to 103451618 208 DNA segment DNA segment, Chr X, Pastuer Institute 36
DXPas37 X 103452612 to 103452814 202 DNA segment DNA segment, Chr X, Pasteur Institute 37