MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:102789166-102936353

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm5166	X	102794298 to 102796833	2535	+	pseudogene	predicted pseudogene 5166
Gm25358	X	102801184 to 102801284	100	+	rRNA gene	predicted gene, 25358
Dmrtc1c1	X	102802963 to 102809942	6979	+	protein coding gene	DMRT-like family C1c1
Gm9126	X	102818372 to 102820073	1701	+	pseudogene	predicted pseudogene 9126
Gm16511	X	102830950 to 102833804	2854	+	pseudogene	predicted gene 16511
Gm24509	X	102838155 to 102838255	100	+	rRNA gene	predicted gene, 24509
Dmrtc1c2	X	102847639 to 102854616	6977	-	protein coding gene	DMRT-like family C1c2
Gm26152	X	102856291 to 102856391	100	-	rRNA gene	predicted gene, 26152
1700031F05Rik	X	102859166 to 102866353	7187	-	protein coding gene	RIKEN cDNA 1700031F05 gene
Gm9133	X	102880529 to 102882254	1725	-	pseudogene	predicted pseudogene 9133
Dmrtc1a	X	102903216 to 102908687	5471	-	protein coding gene	DMRT-like family C1a
Tssr5660	X	102908899 to 102908910	11	+	TSS region	transcription start site region 5660
1700011M02Rik	X	102908905 to 102909651	746	+	protein coding gene	RIKEN cDNA 1700011M02 gene
Tssr5661	X	102928369 to 102928374	5	+	TSS region	transcription start site region 5661
1700018G05Rik	X	102928372 to 102929094	722	+	lncRNA gene	RIKEN cDNA 1700018G05 gene
Gm5126	X	102932047 to 102934223	2176	-	lncRNA gene	predicted pseudogene 5126
Cpgi22882	X	102933642 to 102934500	858		CpG island	CpG island 22882
Tssr163923	X	102934178 to 102934207	29	-	TSS region	transcription start site region 163923
Tssr5662	X	102935588 to 102935593	5	-	TSS region	transcription start site region 5662