MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:102514165-102774177

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Phka1	X	102513975 to 102644246	130271	-	protein coding gene	phosphorylase kinase alpha 1
Tssr163919	X	102515177 to 102515181	4	-	TSS region	transcription start site region 163919
Cpgi22881	X	102643793 to 102644371	578		CpG island	CpG island 22881
Tssr163920	X	102644165 to 102644177	12	-	TSS region	transcription start site region 163920
Tssr163921	X	102644186 to 102644204	18	-	TSS region	transcription start site region 163921
Tssr163922	X	102644210 to 102644254	44	-	TSS region	transcription start site region 163922
DXMit115.1	X	102652406 to 102652545	139		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 115.1
DXMit115	X	102652518 to 102652667	149		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 115
Gm9109	X	102655659 to 102657063	1404	+	pseudogene	predicted gene 9109
Gm14840	X	102657741 to 102658334	593	-	pseudogene	predicted gene 14840
Gm3880	X	102686292 to 102686972	680	-	lncRNA gene	predicted pseudogene 3880
Gm9112	X	102706890 to 102707635	745	-	protein coding gene	predicted gene 9112
Tssr5659	X	102707850 to 102707858	8	+	TSS region	transcription start site region 5659
Dmrtc1b	X	102707881 to 102715209	7328	+	protein coding gene	DMRT-like family C1b
Gm9115	X	102724402 to 102725749	1347	-	pseudogene	predicted gene 9115
DXMit148	X	102726377 to 102726721	344		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 148
Gm14839	X	102735986 to 102738618	2632	+	pseudogene	predicted gene 14839
Gm4234	X	102754781 to 102757471	2690	+	pseudogene	predicted pseudogene 4234