Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:102250100-102760129

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cited1 X 102247381 to 102252181 4800 - protein coding gene Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
Cpgi22880 X 102250240 to 102252387 2147 CpG island CpG island 22880
Tssr163910 X 102250778 to 102250797 19 - TSS region transcription start site region 163910
Tssr163911 X 102250940 to 102250959 19 - TSS region transcription start site region 163911
Tssr163912 X 102251858 to 102251868 10 - TSS region transcription start site region 163912
Tssr163913 X 102252064 to 102252087 23 - TSS region transcription start site region 163913
Tssr163914 X 102252154 to 102252172 18 - TSS region transcription start site region 163914
Tssr163915 X 102252188 to 102252197 9 - TSS region transcription start site region 163915
Gm14858 X 102252651 to 102257689 5038 + lncRNA gene predicted gene 14858
Gm26318 X 102255430 to 102255525 95 - miRNA gene predicted gene, 26318
Hdac8 X 102284639 to 102505359 220720 - protein coding gene histone deacetylase 8
Gm32262 X 102302336 to 102504960 202624 + lncRNA gene predicted gene, 32262
4732468M13Rik X 102315276 to 102319212 3936 unclassified gene RIKEN cDNA 4732468M13 gene
Tssr163916 X 102505100 to 102505129 29 - TSS region transcription start site region 163916
Tssr163917 X 102505138 to 102505171 33 - TSS region transcription start site region 163917
Tssr163918 X 102505393 to 102505412 19 - TSS region transcription start site region 163918
Phka1 X 102513975 to 102644246 130271 - protein coding gene phosphorylase kinase alpha 1
Tssr163919 X 102515177 to 102515181 4 - TSS region transcription start site region 163919
Cpgi22881 X 102643793 to 102644371 578 CpG island CpG island 22881
Tssr163920 X 102644165 to 102644177 12 - TSS region transcription start site region 163920
Tssr163921 X 102644186 to 102644204 18 - TSS region transcription start site region 163921
Tssr163922 X 102644210 to 102644254 44 - TSS region transcription start site region 163922
DXMit115.1 X 102652406 to 102652545 139 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 115.1
DXMit115 X 102652518 to 102652667 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 115
Gm9109 X 102655659 to 102657063 1404 + pseudogene predicted gene 9109
Gm14840 X 102657741 to 102658334 593 - pseudogene predicted gene 14840
Gm3880 X 102686292 to 102686972 680 - lncRNA gene predicted pseudogene 3880
Gm9112 X 102706890 to 102707635 745 - protein coding gene predicted gene 9112
Tssr5659 X 102707850 to 102707858 8 + TSS region transcription start site region 5659
Dmrtc1b X 102707881 to 102715209 7328 + protein coding gene DMRT-like family C1b
Gm9115 X 102724402 to 102725749 1347 - pseudogene predicted gene 9115
DXMit148 X 102726377 to 102726721 344 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 148
Gm14839 X 102735986 to 102738618 2632 + pseudogene predicted gene 14839
Gm4234 X 102754781 to 102757471 2690 + pseudogene predicted pseudogene 4234