MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:102118194-102238657

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr161714	X	102118473 to 102118504	31	+	TSS region	transcription start site region 161714
Tssr161715	X	102119457 to 102119490	33	+	TSS region	transcription start site region 161715
Pin4	X	102119465 to 102127673	8208	+	protein coding gene	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
Gm16471	X	102138638 to 102139230	592	+	pseudogene	predicted gene 16471
Ercc6l	X	102142820 to 102157091	14271	-	protein coding gene	excision repair cross-complementing rodent repair deficiency complementation group 6 like
Tssr163904	X	102156981 to 102157062	81	-	TSS region	transcription start site region 163904
Tssr163905	X	102157065 to 102157096	31	-	TSS region	transcription start site region 163905
Gm9103	X	102178194 to 102178657	463	-	pseudogene	predicted gene 9103
Cpgi22878	X	102178532 to 102178736	204		CpG island	CpG island 22878
Rps4x	X	102184941 to 102189391	4450	-	protein coding gene	ribosomal protein S4, X-linked
Cpgi22879	X	102189108 to 102189290	182		CpG island	CpG island 22879
Tssr163906	X	102189299 to 102189308	9	-	TSS region	transcription start site region 163906
Tssr163907	X	102189310 to 102189338	28	-	TSS region	transcription start site region 163907
Tssr163908	X	102189339 to 102189364	25	-	TSS region	transcription start site region 163908
Tssr163909	X	102189371 to 102189388	17	-	TSS region	transcription start site region 163909
Tssr5658	X	102189403 to 102189408	5	-	TSS region	transcription start site region 5658
Gm14859	X	102208402 to 102208758	356	+	pseudogene	predicted gene 14859