Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:102038638-102239230

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nhsl2 X 101849385 to 102092055 242670 + protein coding gene NHS-like 2
Tssr163898 X 102042521 to 102042571 50 - TSS region transcription start site region 163898
Tssr163899 X 102050723 to 102050729 6 - TSS region transcription start site region 163899
Tssr161712 X 102050807 to 102050821 14 + TSS region transcription start site region 161712
Tssr161713 X 102050837 to 102050853 16 + TSS region transcription start site region 161713
Rtl5 X 102066544 to 102071304 4760 - protein coding gene retrotransposon Gag like 5
Cpgi22877 X 102070898 to 102071519 621 CpG island CpG island 22877
Tssr163900 X 102071188 to 102071204 16 - TSS region transcription start site region 163900
Tssr163901 X 102071226 to 102071239 13 - TSS region transcription start site region 163901
Tssr163902 X 102071300 to 102071322 22 - TSS region transcription start site region 163902
Tssr163903 X 102071325 to 102071341 16 - TSS region transcription start site region 163903
Gm5125 X 102106603 to 102107226 623 - pseudogene predicted gene 5125
Tssr161714 X 102118473 to 102118504 31 + TSS region transcription start site region 161714
Tssr161715 X 102119457 to 102119490 33 + TSS region transcription start site region 161715
Pin4 X 102119465 to 102127673 8208 + protein coding gene protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
Gm16471 X 102138638 to 102139230 592 + pseudogene predicted gene 16471
Ercc6l X 102142820 to 102157091 14271 - protein coding gene excision repair cross-complementing rodent repair deficiency complementation group 6 like
Tssr163904 X 102156981 to 102157062 81 - TSS region transcription start site region 163904
Tssr163905 X 102157065 to 102157096 31 - TSS region transcription start site region 163905
Gm9103 X 102178194 to 102178657 463 - pseudogene predicted gene 9103
Cpgi22878 X 102178532 to 102178736 204 CpG island CpG island 22878
Rps4x X 102184941 to 102189391 4450 - protein coding gene ribosomal protein S4, X-linked
Cpgi22879 X 102189108 to 102189290 182 CpG island CpG island 22879
Tssr163906 X 102189299 to 102189308 9 - TSS region transcription start site region 163906
Tssr163907 X 102189310 to 102189338 28 - TSS region transcription start site region 163907
Tssr163908 X 102189339 to 102189364 25 - TSS region transcription start site region 163908
Tssr163909 X 102189371 to 102189388 17 - TSS region transcription start site region 163909
Tssr5658 X 102189403 to 102189408 5 - TSS region transcription start site region 5658
Gm14859 X 102208402 to 102208758 356 + pseudogene predicted gene 14859