Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:101562358-101742375

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Taf1 X 101532734 to 101601789 69055 + protein coding gene TATA-box binding protein associated factor 1
Tssr163890 X 101639771 to 101639775 4 - TSS region transcription start site region 163890
Tssr161681 X 101640056 to 101640108 52 + TSS region transcription start site region 161681
Ogt X 101640060 to 101684351 44291 + protein coding gene O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
Cpgi22872 X 101640889 to 101641043 154 CpG island CpG island 22872
Tssr161682 X 101641058 to 101641069 11 + TSS region transcription start site region 161682
8430425A16Rik X 101644522 to 101645345 823 unclassified gene RIKEN cDNA 8430425A16 gene
Tssr161683 X 101649386 to 101649401 15 + TSS region transcription start site region 161683
Tssr161684 X 101652358 to 101652375 17 + TSS region transcription start site region 161684
Tssr161685 X 101652386 to 101652411 25 + TSS region transcription start site region 161685
Tssr161686 X 101652475 to 101652487 12 + TSS region transcription start site region 161686
Tssr161687 X 101652502 to 101652515 13 + TSS region transcription start site region 161687
Tssr161688 X 101652530 to 101652562 32 + TSS region transcription start site region 161688
Tssr161689 X 101652606 to 101652645 39 + TSS region transcription start site region 161689
Tssr161690 X 101652704 to 101652731 27 + TSS region transcription start site region 161690
Tssr161691 X 101653224 to 101653237 13 + TSS region transcription start site region 161691
Tssr161692 X 101653469 to 101653558 89 + TSS region transcription start site region 161692
Tssr161693 X 101653618 to 101653624 6 + TSS region transcription start site region 161693
Tssr161694 X 101655550 to 101655560 10 + TSS region transcription start site region 161694
Tssr161695 X 101667344 to 101667362 18 + TSS region transcription start site region 161695
Tssr161696 X 101673039 to 101673072 33 + TSS region transcription start site region 161696
Tssr161697 X 101680061 to 101680077 16 + TSS region transcription start site region 161697
DXMit168 X 101681261 to 101681381 120 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 168
Tssr161698 X 101682936 to 101682948 12 + TSS region transcription start site region 161698
Tssr161699 X 101683140 to 101683159 19 + TSS region transcription start site region 161699
Gm14845 X 101691545 to 101691850 305 - pseudogene predicted gene 14845
Tssr161700 X 101695833 to 101695841 8 + TSS region transcription start site region 161700
Cpgi22873 X 101696840 to 101698450 1610 CpG island CpG island 22873
Tssr161701 X 101706008 to 101706011 3 + TSS region transcription start site region 161701
Gm9089 X 101709036 to 101709561 525 - pseudogene predicted gene 9089
Cxcr3 X 101731535 to 101734147 2612 - protein coding gene chemokine (C-X-C motif) receptor 3
Tssr163891 X 101734110 to 101734123 13 - TSS region transcription start site region 163891
Tssr163892 X 101734125 to 101734142 17 - TSS region transcription start site region 163892
Tssr163893 X 101734157 to 101734168 11 - TSS region transcription start site region 163893
Tssr163894 X 101734200 to 101734211 11 - TSS region transcription start site region 163894