Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:101309348-101649559

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm21986 X 101295839 to 101321348 25509 + unclassified non-coding RNA gene predicted gene 21986
Nlgn3 X 101299179 to 101321350 22171 + protein coding gene neuroligin 3
Tssr161650 X 101320041 to 101320060 19 + TSS region transcription start site region 161650
Tssr161651 X 101320169 to 101320184 15 + TSS region transcription start site region 161651
Tssr161652 X 101320914 to 101320930 16 + TSS region transcription start site region 161652
Tssr161653 X 101321241 to 101321246 5 + TSS region transcription start site region 161653
Cpgi22866 X 101332458 to 101333091 633 CpG island CpG island 22866
Tssr163883 X 101332503 to 101332549 46 - TSS region transcription start site region 163883
Gm31385 X 101338088 to 101341552 3464 + lncRNA gene predicted gene, 31385
Tssr161654 X 101376359 to 101376373 14 + TSS region transcription start site region 161654
Gjb1 X 101376378 to 101385629 9251 + protein coding gene gap junction protein, beta 1
Tssr161655 X 101377267 to 101377281 14 + TSS region transcription start site region 161655
Tssr161656 X 101377290 to 101377317 27 + TSS region transcription start site region 161656
Tssr161657 X 101377323 to 101377334 11 + TSS region transcription start site region 161657
Tssr161658 X 101383726 to 101383741 15 + TSS region transcription start site region 161658
Tssr161659 X 101383765 to 101383777 12 + TSS region transcription start site region 161659
Tssr161660 X 101383781 to 101383802 21 + TSS region transcription start site region 161660
Tssr161661 X 101384296 to 101384311 15 + TSS region transcription start site region 161661
Tssr161662 X 101384443 to 101384454 11 + TSS region transcription start site region 161662
Tssr161663 X 101384490 to 101384508 18 + TSS region transcription start site region 161663
Tssr161664 X 101384630 to 101384643 13 + TSS region transcription start site region 161664
Tssr163884 X 101384644 to 101384681 37 - TSS region transcription start site region 163884
Cpgi22867 X 101384665 to 101385045 380 CpG island CpG island 22867
Tssr161665 X 101384860 to 101384873 13 + TSS region transcription start site region 161665
Tssr161666 X 101396509 to 101396512 3 + TSS region transcription start site region 161666
Zmym3 X 101404384 to 101420849 16465 - protein coding gene zinc finger, MYM-type 3
Cpgi22868 X 101419142 to 101419433 291 CpG island CpG island 22868
Cpgi22869 X 101419709 to 101420287 578 CpG island CpG island 22869
Tssr163885 X 101419776 to 101419787 11 - TSS region transcription start site region 163885
Tssr163886 X 101419788 to 101419859 71 - TSS region transcription start site region 163886
Tssr163887 X 101420206 to 101420225 19 - TSS region transcription start site region 163887
Tssr163888 X 101420348 to 101420364 16 - TSS region transcription start site region 163888
Tssr163889 X 101421140 to 101421158 18 - TSS region transcription start site region 163889
Cpgi22870 X 101429372 to 101429970 598 CpG island CpG island 22870
Nono X 101429651 to 101448593 18942 + protein coding gene non-POU-domain-containing, octamer binding protein
Tssr161667 X 101429654 to 101429708 54 + TSS region transcription start site region 161667
Tssr161668 X 101447888 to 101447906 18 + TSS region transcription start site region 161668
Tssr161669 X 101447916 to 101447938 22 + TSS region transcription start site region 161669
Tssr161670 X 101447991 to 101448001 10 + TSS region transcription start site region 161670
Tssr161671 X 101449061 to 101449068 7 + TSS region transcription start site region 161671
Tssr161672 X 101449078 to 101449089 11 + TSS region transcription start site region 161672
Tssr161673 X 101449103 to 101449135 32 + TSS region transcription start site region 161673
Itgb1bp2 X 101449109 to 101453541 4432 + protein coding gene integrin beta 1 binding protein 2
Tssr161674 X 101449164 to 101449170 6 + TSS region transcription start site region 161674
DXMit230 X 101454619 to 101454742 123 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 230
Tssr161675 X 101479289 to 101479300 11 + TSS region transcription start site region 161675
Gm14843 X 101479348 to 101479559 211 + pseudogene predicted gene 14843
Gm6184 X 101518985 to 101520242 1257 + pseudogene predicted gene 6184
Tssr161676 X 101522273 to 101522304 31 + TSS region transcription start site region 161676
Tssr161677 X 101527583 to 101527620 37 + TSS region transcription start site region 161677
Cpgi22871 X 101532479 to 101533113 634 CpG island CpG island 22871
Taf1 X 101532734 to 101601789 69055 + protein coding gene TATA-box binding protein associated factor 1
Tssr161678 X 101532735 to 101532777 42 + TSS region transcription start site region 161678
Tssr161679 X 101532792 to 101532875 83 + TSS region transcription start site region 161679
Tssr161680 X 101533519 to 101533536 17 + TSS region transcription start site region 161680
Tssr163890 X 101639771 to 101639775 4 - TSS region transcription start site region 163890
Tssr161681 X 101640056 to 101640108 52 + TSS region transcription start site region 161681
Ogt X 101640060 to 101684351 44291 + protein coding gene O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
Cpgi22872 X 101640889 to 101641043 154 CpG island CpG island 22872
Tssr161682 X 101641058 to 101641069 11 + TSS region transcription start site region 161682
8430425A16Rik X 101644522 to 101645345 823 unclassified gene RIKEN cDNA 8430425A16 gene
Tssr161683 X 101649386 to 101649401 15 + TSS region transcription start site region 161683