Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:100324838-100746108

Filter by:
46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14829 X 100329692 to 100330828 1136 + pseudogene predicted gene 14829
Gm14828 X 100337514 to 100338665 1151 + pseudogene predicted gene 14828
Mir676 X 100381097 to 100381185 88 + miRNA gene microRNA 676
Eda X 100400760 to 99975606 -425154 + protein coding gene ectodysplasin-A
Awat2 X 100402221 to 100442717 40496 - protein coding gene acyl-CoA wax alcohol acyltransferase 2
Tssr163845 X 100412591 to 100412606 15 - TSS region transcription start site region 163845
Tssr161607 X 100428906 to 100428912 6 + TSS region transcription start site region 161607
Otud6a X 100429013 to 100429885 872 + protein coding gene OTU domain containing 6A
Cpgi22858 X 100429042 to 100429933 891 CpG island CpG island 22858
Igbp1 X 100494291 to 100516125 21834 + protein coding gene immunoglobulin (CD79A) binding protein 1
Tssr161608 X 100494334 to 100494366 32 + TSS region transcription start site region 161608
Tssr161609 X 100524258 to 100524288 30 + TSS region transcription start site region 161609
Tssr161610 X 100524831 to 100524844 13 + TSS region transcription start site region 161610
Dgat2l6 X 100524838 to 100546108 21270 + protein coding gene diacylglycerol O-acyltransferase 2-like 6
Tssr161611 X 100524870 to 100524881 11 + TSS region transcription start site region 161611
Tssr161612 X 100572234 to 100572265 31 + TSS region transcription start site region 161612
Awat1 X 100572251 to 100578205 5954 + protein coding gene acyl-CoA wax alcohol acyltransferase 1
Gm6175 X 100585009 to 100585408 399 + pseudogene predicted gene 6175
Tssr161613 X 100585438 to 100585463 25 + TSS region transcription start site region 161613
P2ry4 X 100590154 to 100594869 4715 - protein coding gene pyrimidinergic receptor P2Y, G-protein coupled, 4
Tssr163846 X 100594860 to 100594876 16 - TSS region transcription start site region 163846
Arr3 X 100605497 to 100618493 12996 + protein coding gene arrestin 3, retinal
Tssr161614 X 100605535 to 100605548 13 + TSS region transcription start site region 161614
Pdzd11 X 100622880 to 100625974 3094 - protein coding gene PDZ domain containing 11
Cpgi22859 X 100625818 to 100626567 749 CpG island CpG island 22859
Tssr163847 X 100625883 to 100625900 17 - TSS region transcription start site region 163847
Tssr163848 X 100625901 to 100625954 53 - TSS region transcription start site region 163848
Kif4 X 100626065 to 100727271 101206 + protein coding gene kinesin family member 4
Tssr161615 X 100626072 to 100626158 86 + TSS region transcription start site region 161615
Tssr163849 X 100626597 to 100626611 14 - TSS region transcription start site region 163849
Tssr161616 X 100656447 to 100656451 4 + TSS region transcription start site region 161616
Tssr161617 X 100706841 to 100706842 1 + TSS region transcription start site region 161617
Tssr161618 X 100729818 to 100729823 5 + TSS region transcription start site region 161618
Tssr161619 X 100729836 to 100729846 10 + TSS region transcription start site region 161619
Gdpd2 X 100729873 to 100738895 9022 + protein coding gene glycerophosphodiester phosphodiesterase domain containing 2
Tssr161620 X 100729917 to 100729963 46 + TSS region transcription start site region 161620
Tssr161621 X 100729980 to 100729994 14 + TSS region transcription start site region 161621
Tssr161622 X 100730119 to 100730122 3 + TSS region transcription start site region 161622
Tssr161623 X 100730126 to 100730141 15 + TSS region transcription start site region 161623
Tssr161624 X 100730156 to 100730167 11 + TSS region transcription start site region 161624
Tssr161625 X 100730178 to 100730189 11 + TSS region transcription start site region 161625
Gm14866 X 100736983 to 100740929 3946 - unclassified non-coding RNA gene predicted gene 14866
DXMit229 X 100739674 to 100739774 100 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 229
Tssr161626 X 100740905 to 100740907 2 + TSS region transcription start site region 161626
Gm14902 X 100740995 to 100748671 7676 + lincRNA gene predicted gene 14902
Tssr5653 X 100741090 to 100741094 4 + TSS region transcription start site region 5653