Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:99529496-99769256

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Armc8	9	99478372 to 99568899	90527	-	protein coding gene	armadillo repeat containing 8
Cpgi22196	9	99568113 to 99569086	973		CpG island	CpG island 22196
Tssr91072	9	99568640 to 99568678	38	-	TSS region	transcription start site region 91072
Tssr91073	9	99568849 to 99568911	62	-	TSS region	transcription start site region 91073
Cpgi22197	9	99575614 to 99576310	696		CpG island	CpG island 22197
Dbr1	9	99575775 to 99584461	8686	+	protein coding gene	debranching RNA lariats 1
Tssr86684	9	99575776 to 99575829	53	+	TSS region	transcription start site region 86684
Tssr86685	9	99612468 to 99612529	61	+	TSS region	transcription start site region 86685
A4gnt	9	99612502 to 99622367	9865	+	protein coding gene	alpha-1,4-N-acetylglucosaminyltransferase
Tssr86686	9	99612545 to 99612557	12	+	TSS region	transcription start site region 86686
Dzip1l	9	99629496 to 99669256	39760	+	protein coding gene	DAZ interacting protein 1-like
Tssr86687	9	99629531 to 99629592	61	+	TSS region	transcription start site region 86687
Cpgi22198	9	99629549 to 99630121	572		CpG island	CpG island 22198
Tssr86688	9	99629823 to 99629853	30	+	TSS region	transcription start site region 86688
Tssr86689	9	99629855 to 99629876	21	+	TSS region	transcription start site region 86689
Tssr86690	9	99632643 to 99632658	15	+	TSS region	transcription start site region 86690
Cldn18	9	99690796 to 99717267	26471	-	protein coding gene	claudin 18
Tssr91074	9	99691684 to 99691687	3	-	TSS region	transcription start site region 91074
Tssr91075	9	99692179 to 99692204	25	-	TSS region	transcription start site region 91075
Tssr91076	9	99692487 to 99692503	16	-	TSS region	transcription start site region 91076
Tssr91077	9	99692570 to 99692582	12	-	TSS region	transcription start site region 91077
Gm16004	9	99708399 to 99756043	47644	+	antisense lncRNA gene	predicted gene 16004
Tssr91078	9	99709952 to 99709988	36	-	TSS region	transcription start site region 91078
Tssr91079	9	99710005 to 99710022	17	-	TSS region	transcription start site region 91079
Tssr91080	9	99710069 to 99710085	16	-	TSS region	transcription start site region 91080
Cpgi22199	9	99717155 to 99717319	164		CpG island	CpG island 22199
Tssr91081	9	99717259 to 99717274	15	-	TSS region	transcription start site region 91081
Cpgi22200	9	99730525 to 99730804	279		CpG island	CpG island 22200
Gm23949	9	99750391 to 99750517	126	-	snoRNA gene	predicted gene, 23949