Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:98443730-98746660

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbp1 9 98422961 to 98446551 23590 + protein coding gene retinol binding protein 1, cellular
Tssr86652 9 98486067 to 98486106 39 + TSS region transcription start site region 86652
Tssr86653 9 98486110 to 98486125 15 + TSS region transcription start site region 86653
D9Dcr28 9 98487056 to 98487154 98 DNA segment DNA segment, Chr 9, Derry C. Roopenian 28
D9Mit211.1 9 98489768 to 98489956 188 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 211.1
D9Mit211.3 9 98490164 to 98490306 142 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 211.3
Tssr86654 9 98490353 to 98490372 19 + TSS region transcription start site region 86654
Tssr86655 9 98490522 to 98490536 14 + TSS region transcription start site region 86655
Rbp2 9 98490537 to 98509771 19234 + protein coding gene retinol binding protein 2, cellular
Tssr86656 9 98490545 to 98490562 17 + TSS region transcription start site region 86656
Gm37113 9 98493968 to 98495124 1156 + unclassified gene predicted gene, 37113
Tssr86657 9 98498707 to 98498735 28 + TSS region transcription start site region 86657
Tssr86658 9 98504754 to 98504766 12 + TSS region transcription start site region 86658
Tssr2985 9 98504945 to 98504956 11 + TSS region transcription start site region 2985
Tssr86659 9 98509663 to 98509683 20 + TSS region transcription start site region 86659
Tssr86660 9 98509727 to 98509738 11 + TSS region transcription start site region 86660
Tssr86661 9 98515519 to 98515526 7 + TSS region transcription start site region 86661
4930579K19Rik 9 98562460 to 98563611 1151 - lncRNA gene RIKEN cDNA 4930579K19 gene
Cpgi22179 9 98563177 to 98564170 993 CpG island CpG island 22179
Tssr91030 9 98563580 to 98563620 40 - TSS region transcription start site region 91030
Tssr86662 9 98563696 to 98563698 2 + TSS region transcription start site region 86662
Tssr86663 9 98563704 to 98563737 33 + TSS region transcription start site region 86663
Copb2 9 98563731 to 98588375 24644 + protein coding gene coatomer protein complex, subunit beta 2 (beta prime)
Tssr86664 9 98563742 to 98563775 33 + TSS region transcription start site region 86664
Gm47147 9 98575308 to 98576766 1458 - pseudogene predicted gene, 47147
Mrps22 9 98588730 to 98601660 12930 - protein coding gene mitochondrial ribosomal protein S22
Gm37637 9 98590495 to 98591750 1255 + antisense lncRNA gene predicted gene, 37637
Cpgi22180 9 98601252 to 98601818 566 CpG island CpG island 22180
Tssr91031 9 98601642 to 98601677 35 - TSS region transcription start site region 91031
Gm27919 9 98705730 to 98705836 106 - unclassified non-coding RNA gene predicted gene, 27919
Pisrt1 9 98705752 to 98706266 514 - unclassified gene polled intersex syndrome regulated transcript 1
D9Mit275 9 98732427 to 98732545 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 275