Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:96975281-97211041

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spsb4 9 96943482 to 97018355 74873 - protein coding gene splA/ryanodine receptor domain and SOCS box containing 4
Tssr91012 9 96984188 to 96984199 11 - TSS region transcription start site region 91012
Tssr91013 9 96984236 to 96984246 10 - TSS region transcription start site region 91013
Cpgi22172 9 96995496 to 96996242 746 CpG island CpG island 22172
Gm16010 9 97013839 to 97018239 4400 + antisense lncRNA gene predicted gene 16010
Tssr86624 9 97015940 to 97015952 12 + TSS region transcription start site region 86624
Tssr86625 9 97015953 to 97015983 30 + TSS region transcription start site region 86625
Tssr2981 9 97015995 to 97015999 4 + TSS region transcription start site region 2981
Tssr86626 9 97016167 to 97016194 27 + TSS region transcription start site region 86626
Cpgi22173 9 97017245 to 97019575 2330 CpG island CpG island 22173
Tssr91014 9 97018744 to 97018761 17 - TSS region transcription start site region 91014
Tssr91015 9 97018823 to 97018835 12 - TSS region transcription start site region 91015
Tssr91016 9 97018851 to 97018879 28 - TSS region transcription start site region 91016
Tssr91017 9 97019044 to 97019068 24 - TSS region transcription start site region 91017
Gm18291 9 97042562 to 97042862 300 - pseudogene predicted gene, 18291
Gm19325 9 97048132 to 97055221 7089 - lincRNA gene predicted gene, 19325
Gm26767 9 97068183 to 97073429 5246 + lincRNA gene predicted gene, 26767
Slc25a36 9 97075281 to 97111041 35760 - protein coding gene solute carrier family 25, member 36
Tssr91018 9 97076894 to 97076897 3 - TSS region transcription start site region 91018
Gm16185 9 97085326 to 97088610 3284 + antisense lncRNA gene predicted gene 16185
Tssr91019 9 97090825 to 97090828 3 - TSS region transcription start site region 91019
Tssr86627 9 97103913 to 97103925 12 + TSS region transcription start site region 86627
Tssr86628 9 97103944 to 97103953 9 + TSS region transcription start site region 86628
Cpgi22174 9 97110491 to 97111548 1057 CpG island CpG island 22174
Tssr86629 9 97110609 to 97110652 43 + TSS region transcription start site region 86629
Tssr91020 9 97111027 to 97111067 40 - TSS region transcription start site region 91020
Tssr91021 9 97111117 to 97111159 42 - TSS region transcription start site region 91021
Tssr91022 9 97111162 to 97111175 13 - TSS region transcription start site region 91022
Tssr86630 9 97111302 to 97111319 17 + TSS region transcription start site region 86630
Tssr86631 9 97141113 to 97141139 26 + TSS region transcription start site region 86631
Tssr86632 9 97179153 to 97179163 10 + TSS region transcription start site region 86632
Rpl7a-ps10 9 97179179 to 97179976 797 + pseudogene ribosomal protein L7A, pseudogene 10
Gm5371 9 97209044 to 97210880 1836 - pseudogene predicted gene 5371