Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:96677456-96887496

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr90978 9 96685326 to 96685338 12 - TSS region transcription start site region 90978
Zbtb38 9 96685391 to 96731675 46284 - protein coding gene zinc finger and BTB domain containing 38
Tssr90979 9 96691749 to 96691776 27 - TSS region transcription start site region 90979
Tssr90980 9 96696377 to 96696428 51 - TSS region transcription start site region 90980
Tssr86613 9 96705804 to 96705835 31 + TSS region transcription start site region 86613
A930006L05Rik 9 96705828 to 96711449 5621 + antisense lncRNA gene RIKEN cDNA A930006L05 gene
Tssr90981 9 96713143 to 96713147 4 - TSS region transcription start site region 90981
Tssr90982 9 96713753 to 96713755 2 - TSS region transcription start site region 90982
Cpgi22169 9 96719371 to 96720247 876 CpG island CpG island 22169
Gm6328 9 96719381 to 96720299 918 unclassified gene predicted gene 6328
Tssr90983 9 96719404 to 96719479 75 - TSS region transcription start site region 90983
Tssr86614 9 96719464 to 96719518 54 + TSS region transcription start site region 86614
Tssr90984 9 96719549 to 96719564 15 - TSS region transcription start site region 90984
Tssr90985 9 96719809 to 96719889 80 - TSS region transcription start site region 90985
Tssr90986 9 96719897 to 96719982 85 - TSS region transcription start site region 90986
Tssr90987 9 96720040 to 96720059 19 - TSS region transcription start site region 90987
Tssr90988 9 96725971 to 96725975 4 - TSS region transcription start site region 90988
Tssr90989 9 96731361 to 96731372 11 - TSS region transcription start site region 90989
Tssr90990 9 96731401 to 96731415 14 - TSS region transcription start site region 90990
E030011O05Rik 9 96731575 to 96752831 21256 - lncRNA gene RIKEN cDNA E030011O05 gene
Tssr90991 9 96732174 to 96732201 27 - TSS region transcription start site region 90991
Tssr90992 9 96732217 to 96732230 13 - TSS region transcription start site region 90992
Tssr90993 9 96732271 to 96732284 13 - TSS region transcription start site region 90993
Tssr90994 9 96732300 to 96732326 26 - TSS region transcription start site region 90994
Tssr90995 9 96737605 to 96737611 6 - TSS region transcription start site region 90995
Tssr90996 9 96752653 to 96752735 82 - TSS region transcription start site region 90996
Tssr90997 9 96752822 to 96752869 47 - TSS region transcription start site region 90997
Cpgi22170 9 96759113 to 96759337 224 CpG island CpG island 22170
Tssr86615 9 96759618 to 96759633 15 + TSS region transcription start site region 86615
C430002N11Rik 9 96765562 to 96774397 8835 + lncRNA gene RIKEN cDNA C430002N11 gene
Tssr86616 9 96765572 to 96765580 8 + TSS region transcription start site region 86616
Tssr86617 9 96766811 to 96766836 25 + TSS region transcription start site region 86617
Tssr90998 9 96766859 to 96766898 39 - TSS region transcription start site region 90998
Tssr86618 9 96782456 to 96782496 40 + TSS region transcription start site region 86618
Tssr86619 9 96786315 to 96786326 11 + TSS region transcription start site region 86619
Tssr90999 9 96787742 to 96787753 11 - TSS region transcription start site region 90999
Tssr91000 9 96787756 to 96787763 7 - TSS region transcription start site region 91000
Tssr91001 9 96787843 to 96787850 7 - TSS region transcription start site region 91001
Tssr91002 9 96787865 to 96787880 15 - TSS region transcription start site region 91002
Tssr91003 9 96787881 to 96787912 31 - TSS region transcription start site region 91003
Tssr91004 9 96787914 to 96787955 41 - TSS region transcription start site region 91004
Tssr86620 9 96799786 to 96799796 10 + TSS region transcription start site region 86620
Tssr91005 9 96800515 to 96800537 22 - TSS region transcription start site region 91005
Tssr86621 9 96800625 to 96800635 10 + TSS region transcription start site region 86621
Gm28688 9 96809756 to 96810023 267 + pseudogene predicted gene 28688
Gm8520 9 96813467 to 96814334 867 - pseudogene predicted gene 8520
Pxylp1 9 96823336 to 96892669 69333 - protein coding gene 2-phosphoxylose phosphatase 1
Tssr91006 9 96854567 to 96854570 3 - TSS region transcription start site region 91006
Tssr91007 9 96862974 to 96862985 11 - TSS region transcription start site region 91007