Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:96363161-96513226

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp1b3 9 96332662 to 96364299 31637 - protein coding gene ATPase, Na+/K+ transporting, beta 3 polypeptide
Cpgi22162 9 96363503 to 96364889 1386 CpG island CpG island 22162
Tssr86601 9 96363924 to 96363938 14 + TSS region transcription start site region 86601
Tssr90956 9 96364299 to 96364322 23 - TSS region transcription start site region 90956
Tssr90957 9 96364407 to 96364425 18 - TSS region transcription start site region 90957
Tssr90958 9 96364431 to 96364451 20 - TSS region transcription start site region 90958
Gm39409 9 96378116 to 96396813 18697 - lncRNA gene predicted gene, 39409
Gm40550 9 96385390 to 96399984 14594 + lncRNA gene predicted gene, 40550
Tssr90959 9 96391971 to 96391981 10 - TSS region transcription start site region 90959
Tssr86602 9 96392231 to 96392247 16 + TSS region transcription start site region 86602
Tssr86603 9 96392314 to 96392316 2 + TSS region transcription start site region 86603
Tssr90960 9 96394942 to 96394951 9 - TSS region transcription start site region 90960
Tssr90961 9 96394955 to 96394971 16 - TSS region transcription start site region 90961
Tssr90962 9 96394976 to 96394995 19 - TSS region transcription start site region 90962
D9Dcr27 9 96397773 to 96397886 113 DNA segment DNA segment, Chr 9, Derry C. Roopenian 27
Bglu14 9 96397810 to 96397888 78 QTL blood glucose level 14
D9Mit274 9 96397810 to 96397888 78 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 274
BC043934 9 96435783 to 96438138 2355 - lincRNA gene cDNA sequence BC043934
Cpgi22163 9 96437028 to 96437226 198 CpG island CpG island 22163
Cpgi22164 9 96437503 to 96438219 716 CpG island CpG island 22164
Tssr90963 9 96438161 to 96438226 65 - TSS region transcription start site region 90963
Rnf7 9 96470937 to 96478675 7738 - protein coding gene ring finger protein 7
Cpgi22165 9 96478040 to 96478882 842 CpG island CpG island 22165
Tssr86604 9 96478345 to 96478361 16 + TSS region transcription start site region 86604
Tssr90964 9 96478596 to 96478622 26 - TSS region transcription start site region 90964
Tssr90965 9 96478631 to 96478647 16 - TSS region transcription start site region 90965
Tssr90966 9 96478660 to 96478669 9 - TSS region transcription start site region 90966
Tssr86605 9 96478779 to 96478806 27 + TSS region transcription start site region 86605
Tssr90967 9 96479527 to 96479536 9 - TSS region transcription start site region 90967
Gm28729 9 96486001 to 96525264 39263 - protein coding gene predicted gene 28729
Gm27289 9 96495132 to 96495213 81 - rRNA gene predicted gene, 27289