Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:95406897-95616908

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chst2 9 95400926 to 95407270 6344 - protein coding gene carbohydrate sulfotransferase 2
Cpgi22150 9 95404967 to 95407927 2960 CpG island CpG island 22150
Tssr90904 9 95407108 to 95407119 11 - TSS region transcription start site region 90904
Tssr90905 9 95407184 to 95407191 7 - TSS region transcription start site region 90905
Tssr90906 9 95407201 to 95407212 11 - TSS region transcription start site region 90906
Tssr90907 9 95407227 to 95407239 12 - TSS region transcription start site region 90907
Tssr90908 9 95407240 to 95407276 36 - TSS region transcription start site region 90908
Tssr90909 9 95407281 to 95407299 18 - TSS region transcription start site region 90909
Tssr90910 9 95407303 to 95407333 30 - TSS region transcription start site region 90910
Tssr90911 9 95407350 to 95407361 11 - TSS region transcription start site region 90911
Tssr86547 9 95407425 to 95407439 14 + TSS region transcription start site region 86547
Gm37805 9 95407461 to 95408554 1093 + unclassified gene predicted gene, 37805
Tssr90912 9 95407767 to 95407779 12 - TSS region transcription start site region 90912
Gm8449 9 95410669 to 95411656 987 - pseudogene predicted gene 8449
Gm19193 9 95425631 to 95426360 729 + pseudogene predicted gene, 19193
Gm32133 9 95436951 to 95445368 8417 - lncRNA gene predicted gene, 32133
U2surp 9 95456898 to 95511996 55098 - protein coding gene U2 snRNP-associated SURP domain containing
Tssr90913 9 95460095 to 95460099 4 - TSS region transcription start site region 90913
Tssr90914 9 95462601 to 95462605 4 - TSS region transcription start site region 90914
Tssr90915 9 95472092 to 95472120 28 - TSS region transcription start site region 90915
Tssr90916 9 95474464 to 95474485 21 - TSS region transcription start site region 90916
Tssr90917 9 95489802 to 95489819 17 - TSS region transcription start site region 90917
Tssr90918 9 95489855 to 95489877 22 - TSS region transcription start site region 90918
Cpgi22151 9 95511259 to 95512592 1333 CpG island CpG island 22151
Tssr86548 9 95511267 to 95511289 22 + TSS region transcription start site region 86548
Tssr90919 9 95511857 to 95511892 35 - TSS region transcription start site region 90919
Tssr90920 9 95511897 to 95511908 11 - TSS region transcription start site region 90920
Gm28424 9 95512151 to 95513469 1318 + antisense lncRNA gene predicted gene 28424
Tssr90921 9 95543126 to 95543140 14 - TSS region transcription start site region 90921
D9Mit1004 9 95553401 to 95553641 240 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 1004
Tssr86549 9 95554415 to 95554422 7 + TSS region transcription start site region 86549
Tssr86550 9 95554509 to 95554522 13 + TSS region transcription start site region 86550
Tssr86551 9 95557227 to 95557236 9 + TSS region transcription start site region 86551
Tssr86552 9 95557239 to 95557252 13 + TSS region transcription start site region 86552
Gm32281 9 95558517 to 95559191 674 + lincRNA gene predicted gene, 32281
Cpgi22152 9 95558925 to 95560992 2067 CpG island CpG island 22152
Tssr90922 9 95558953 to 95558983 30 - TSS region transcription start site region 90922
Tssr86553 9 95559079 to 95559096 17 + TSS region transcription start site region 86553
Tssr86554 9 95559119 to 95559148 29 + TSS region transcription start site region 86554
Tssr86555 9 95559149 to 95559161 12 + TSS region transcription start site region 86555
Tssr86556 9 95559320 to 95559331 11 + TSS region transcription start site region 86556
Tssr86557 9 95559349 to 95559367 18 + TSS region transcription start site region 86557
Tssr86558 9 95559371 to 95559391 20 + TSS region transcription start site region 86558
Tssr86559 9 95559533 to 95559544 11 + TSS region transcription start site region 86559
Tssr86560 9 95559571 to 95559583 12 + TSS region transcription start site region 86560
Tssr86561 9 95559599 to 95559652 53 + TSS region transcription start site region 86561
Tssr86562 9 95559661 to 95559705 44 + TSS region transcription start site region 86562
Paqr9 9 95559817 to 95562121 2304 + protein coding gene progestin and adipoQ receptor family member IX
Tssr86563 9 95559915 to 95559960 45 + TSS region transcription start site region 86563
Tssr86564 9 95560036 to 95560045 9 + TSS region transcription start site region 86564
Tssr86565 9 95560397 to 95560430 33 + TSS region transcription start site region 86565
Tssr86566 9 95560433 to 95560448 15 + TSS region transcription start site region 86566
Tssr86567 9 95561091 to 95561107 16 + TSS region transcription start site region 86567
Tssr86568 9 95561559 to 95561562 3 + TSS region transcription start site region 86568
Tssr86569 9 95563754 to 95563757 3 + TSS region transcription start site region 86569
Tssr86570 9 95564468 to 95564472 4 + TSS region transcription start site region 86570
C730029A08Rik 9 95566174 to 95568022 1848 unclassified non-coding RNA gene RIKEN cDNA C730029A08 gene
Tssr90923 9 95577697 to 95577730 33 - TSS region transcription start site region 90923
Gm32542 9 95581428 to 95593332 11904 + lncRNA gene predicted gene, 32542
Tssr86571 9 95581484 to 95581502 18 + TSS region transcription start site region 86571
Cpgi22153 9 95598293 to 95598575 282 CpG island CpG island 22153
Tssr90924 9 95606664 to 95606665 1 - TSS region transcription start site region 90924
Tssr90925 9 95614731 to 95614751 20 - TSS region transcription start site region 90925