Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:95227803-95557806

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc9a9 9 94669909 to 95230445 560536 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 9
Gm32018 9 95300733 to 95310543 9810 - lncRNA gene predicted gene, 32018
Tssr86546 9 95392803 to 95392806 3 + TSS region transcription start site region 86546
Chst2 9 95400926 to 95407270 6344 - protein coding gene carbohydrate sulfotransferase 2
Tssr90899 9 95401048 to 95401053 5 - TSS region transcription start site region 90899
Tssr90900 9 95402238 to 95402242 4 - TSS region transcription start site region 90900
Tssr90901 9 95404509 to 95404541 32 - TSS region transcription start site region 90901
Tssr90902 9 95404542 to 95404561 19 - TSS region transcription start site region 90902
Tssr90903 9 95404734 to 95404748 14 - TSS region transcription start site region 90903
Cpgi22150 9 95404967 to 95407927 2960 CpG island CpG island 22150
Tssr90904 9 95407108 to 95407119 11 - TSS region transcription start site region 90904
Tssr90905 9 95407184 to 95407191 7 - TSS region transcription start site region 90905
Tssr90906 9 95407201 to 95407212 11 - TSS region transcription start site region 90906
Tssr90907 9 95407227 to 95407239 12 - TSS region transcription start site region 90907
Tssr90908 9 95407240 to 95407276 36 - TSS region transcription start site region 90908
Tssr90909 9 95407281 to 95407299 18 - TSS region transcription start site region 90909
Tssr90910 9 95407303 to 95407333 30 - TSS region transcription start site region 90910
Tssr90911 9 95407350 to 95407361 11 - TSS region transcription start site region 90911
Tssr86547 9 95407425 to 95407439 14 + TSS region transcription start site region 86547
Gm37805 9 95407461 to 95408554 1093 + unclassified gene predicted gene, 37805
Tssr90912 9 95407767 to 95407779 12 - TSS region transcription start site region 90912
Gm8449 9 95410669 to 95411656 987 - pseudogene predicted gene 8449
Gm19193 9 95425631 to 95426360 729 + pseudogene predicted gene, 19193
Gm32133 9 95436951 to 95445368 8417 - lncRNA gene predicted gene, 32133
U2surp 9 95456898 to 95511996 55098 - protein coding gene U2 snRNP-associated SURP domain containing
Tssr90913 9 95460095 to 95460099 4 - TSS region transcription start site region 90913
Tssr90914 9 95462601 to 95462605 4 - TSS region transcription start site region 90914
Tssr90915 9 95472092 to 95472120 28 - TSS region transcription start site region 90915
Tssr90916 9 95474464 to 95474485 21 - TSS region transcription start site region 90916
Tssr90917 9 95489802 to 95489819 17 - TSS region transcription start site region 90917
Tssr90918 9 95489855 to 95489877 22 - TSS region transcription start site region 90918
Cpgi22151 9 95511259 to 95512592 1333 CpG island CpG island 22151
Tssr86548 9 95511267 to 95511289 22 + TSS region transcription start site region 86548
Tssr90919 9 95511857 to 95511892 35 - TSS region transcription start site region 90919
Tssr90920 9 95511897 to 95511908 11 - TSS region transcription start site region 90920
Gm28424 9 95512151 to 95513469 1318 + antisense lncRNA gene predicted gene 28424
Tssr90921 9 95543126 to 95543140 14 - TSS region transcription start site region 90921
D9Mit1004 9 95553401 to 95553641 240 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 1004
Tssr86549 9 95554415 to 95554422 7 + TSS region transcription start site region 86549
Tssr86550 9 95554509 to 95554522 13 + TSS region transcription start site region 86550
Tssr86551 9 95557227 to 95557236 9 + TSS region transcription start site region 86551
Tssr86552 9 95557239 to 95557252 13 + TSS region transcription start site region 86552