Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:94546301-95416419

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39404 9 94592196 to 94592508 312 + lncRNA gene predicted gene, 39404
Gm24178 9 94644019 to 94644114 95 + snRNA gene predicted gene, 24178
Gm29395 9 94667208 to 94668818 1610 - lincRNA gene predicted gene 29395
Tssr86526 9 94668866 to 94668882 16 + TSS region transcription start site region 86526
Tssr86527 9 94668895 to 94668912 17 + TSS region transcription start site region 86527
Tssr86528 9 94669619 to 94669641 22 + TSS region transcription start site region 86528
Tssr86529 9 94669876 to 94669928 52 + TSS region transcription start site region 86529
Slc9a9 9 94669909 to 95230445 560536 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 9
Tssr86530 9 94669945 to 94669956 11 + TSS region transcription start site region 86530
Tssr86531 9 94669974 to 94669985 11 + TSS region transcription start site region 86531
Gm16262 9 94695704 to 94702319 6615 - antisense lncRNA gene predicted gene 16262
Tssr86532 9 94696968 to 94696986 18 + TSS region transcription start site region 86532
Tssr90898 9 94702353 to 94702376 23 - TSS region transcription start site region 90898
Tssr86533 9 94713477 to 94713488 11 + TSS region transcription start site region 86533
Tssr86534 9 94713559 to 94713573 14 + TSS region transcription start site region 86534
Tssr86535 9 94743289 to 94743299 10 + TSS region transcription start site region 86535
Tssr86536 9 94743528 to 94743545 17 + TSS region transcription start site region 86536
Mir7656 9 94751829 to 94751890 61 + miRNA gene microRNA 7656
Tssr86537 9 94770209 to 94770210 1 + TSS region transcription start site region 86537
Tssr86538 9 94772824 to 94772829 5 + TSS region transcription start site region 86538
Cpgi22149 9 94837409 to 94837626 217 CpG island CpG island 22149
Tssr86539 9 94946061 to 94946065 4 + TSS region transcription start site region 86539
Tssr86540 9 94971816 to 94971822 6 + TSS region transcription start site region 86540
D9Mit112 9 94981301 to 94981419 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 112
D9Mit112.1 9 94981424 to 94981548 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 112.1
Gm47168 9 94992015 to 94992684 669 - pseudogene predicted gene, 47168
Tssr86541 9 95028598 to 95028611 13 + TSS region transcription start site region 86541
Tssr86542 9 95047859 to 95047862 3 + TSS region transcription start site region 86542
Tssr86543 9 95162922 to 95162941 19 + TSS region transcription start site region 86543
Tssr86544 9 95168201 to 95168221 20 + TSS region transcription start site region 86544
Tssr86545 9 95192922 to 95192926 4 + TSS region transcription start site region 86545
Gm32018 9 95300733 to 95310543 9810 - lncRNA gene predicted gene, 32018
Tssr86546 9 95392803 to 95392806 3 + TSS region transcription start site region 86546
Chst2 9 95400926 to 95407270 6344 - protein coding gene carbohydrate sulfotransferase 2
Tssr90899 9 95401048 to 95401053 5 - TSS region transcription start site region 90899
Tssr90900 9 95402238 to 95402242 4 - TSS region transcription start site region 90900
Tssr90901 9 95404509 to 95404541 32 - TSS region transcription start site region 90901
Tssr90902 9 95404542 to 95404561 19 - TSS region transcription start site region 90902
Tssr90903 9 95404734 to 95404748 14 - TSS region transcription start site region 90903
Cpgi22150 9 95404967 to 95407927 2960 CpG island CpG island 22150
Tssr90904 9 95407108 to 95407119 11 - TSS region transcription start site region 90904
Tssr90905 9 95407184 to 95407191 7 - TSS region transcription start site region 90905
Tssr90906 9 95407201 to 95407212 11 - TSS region transcription start site region 90906
Tssr90907 9 95407227 to 95407239 12 - TSS region transcription start site region 90907
Tssr90908 9 95407240 to 95407276 36 - TSS region transcription start site region 90908
Tssr90909 9 95407281 to 95407299 18 - TSS region transcription start site region 90909
Tssr90910 9 95407303 to 95407333 30 - TSS region transcription start site region 90910
Tssr90911 9 95407350 to 95407361 11 - TSS region transcription start site region 90911
Tssr86547 9 95407425 to 95407439 14 + TSS region transcription start site region 86547
Gm37805 9 95407461 to 95408554 1093 + unclassified gene predicted gene, 37805
Tssr90912 9 95407767 to 95407779 12 - TSS region transcription start site region 90912
Gm8449 9 95410669 to 95411656 987 - pseudogene predicted gene 8449
Psl5 9 112872929 to 94981301 -17891628 QTL promotion susceptibility QTL 5