MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:9449318-10709449

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm47334	9	9564087 to 9583564	19477	+	lincRNA gene	predicted gene, 47334
Gm46102	9	9579337 to 9619784	40447	-	lincRNA gene	predicted gene, 46102
Gm26195	9	9670941 to 9671041	100	-	miRNA gene	predicted gene, 26195
D9Mit1011	9	9777414 to 9777526	112		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 1011
D9Mit1010	9	9777520 to 9777668	148		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 1010
Mir6237	9	9894431 to 9894521	90	+	miRNA gene	microRNA 6237
D9Dcr136	9	10009317 to 10009416	99		DNA segment	DNA Segment, Chr 9, Derry C. Roopenian 136
D9Mit43	9	10079318 to 10079449	131		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 43
Gm39289	9	10080457 to 10092882	12425	+	lncRNA gene	predicted gene, 39289
Tssr83797	9	10080484 to 10080527	43	+	TSS region	transcription start site region 83797
Gm24496	9	10290478 to 10290587	109	-	miRNA gene	predicted gene, 24496
Gm25086	9	10295047 to 10295156	109	-	miRNA gene	predicted gene, 25086
D9Mit251	9	10324074 to 10324198	124		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 251
Tssr88131	9	10412300 to 10412303	3	-	TSS region	transcription start site region 88131
Tssr83798	9	10446538 to 10446552	14	+	TSS region	transcription start site region 83798
Gm46103	9	10475935 to 10476275	340	+	pseudogene	predicted gene, 46103
D9Mit1009	9	10666974 to 10667134	160		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 1009
Cntn5	9	10904775 to 9660891	-1243884	-	protein coding gene	contactin 5