Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:92532347-93352348

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Mit272 9 92532755 to 92532859 104 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 272
Gm38391 9 92538801 to 92542869 4068 - unclassified gene predicted gene, 38391
B430319G15Rik 9 92538801 to 92542869 4068 - lncRNA gene RIKEN cDNA B430319G15 gene
Gm37545 9 92539936 to 92540083 147 - pseudogene predicted gene, 37545
Cpgi22147 9 92541857 to 92542977 1120 CpG island CpG island 22147
Plod2 9 92542223 to 92608428 66205 + protein coding gene procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
Tssr86520 9 92542255 to 92542272 17 + TSS region transcription start site region 86520
Tssr86521 9 92542430 to 92542439 9 + TSS region transcription start site region 86521
Tssr86522 9 92608163 to 92608176 13 + TSS region transcription start site region 86522
Gm2495 9 92612512 to 92612977 465 - pseudogene predicted gene 2495
Tssr86523 9 92691915 to 92691919 4 + TSS region transcription start site region 86523
Gm29396 9 92691943 to 92692756 813 + pseudogene predicted gene 29396
D9Mit320 9 92709098 to 92709244 146 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-320
4933400C23Rik 9 92718716 to 92795711 76995 + lincRNA gene RIKEN cDNA 4933400C23 gene
D9Mit238 9 92876480 to 92876624 144 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 238
Gm28054 9 92895832 to 92915791 19959 + lincRNA gene predicted gene 28054
Tssr2973 9 92942347 to 92942348 1 + TSS region transcription start site region 2973
Gm29397 9 92976226 to 92976558 332 + pseudogene predicted gene 29397
1700034K08Rik 9 92979916 to 93005733 25817 - lincRNA gene RIKEN cDNA 1700034K08 gene
Tssr90890 9 93005726 to 93005761 35 - TSS region transcription start site region 90890
Gm18841 9 93086288 to 93087128 840 - pseudogene predicted gene, 18841