Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:91414770-92264874

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29478 9 91404474 to 91562818 158344 + lincRNA gene predicted gene 29478
Tssr86489 9 91437849 to 91437854 5 + TSS region transcription start site region 86489
Gm39400 9 91707711 to 91772768 65057 + lncRNA gene predicted gene, 39400
Gm37987 9 91757322 to 91758146 824 - unclassified gene predicted gene, 37987
Gm26101 9 91839770 to 91839874 104 + snRNA gene predicted gene, 26101
Gm31409 9 91922664 to 91961118 38454 - lincRNA gene predicted gene, 31409
Tssr90883 9 91961128 to 91961141 13 - TSS region transcription start site region 90883
Tssr90884 9 91961169 to 91961179 10 - TSS region transcription start site region 90884
Gm46147 9 92143362 to 92175188 31826 - lncRNA gene predicted gene, 46147
Gm31588 9 92186967 to 92228744 41777 - lncRNA gene predicted gene, 31588
Plscr5 9 92192936 to 92209772 16836 + protein coding gene phospholipid scramblase family, member 5
Tssr86490 9 92193088 to 92193100 12 + TSS region transcription start site region 86490
Tssr86491 9 92193101 to 92193118 17 + TSS region transcription start site region 86491
Tssr86492 9 92193152 to 92193157 5 + TSS region transcription start site region 86492
Gm31531 9 92201834 to 92207771 5937 - lncRNA gene predicted gene, 31531
Tssr86493 9 92222286 to 92222287 1 + TSS region transcription start site region 86493
Tssr90885 9 92227242 to 92227265 23 - TSS region transcription start site region 90885
Tssr90886 9 92227269 to 92227285 16 - TSS region transcription start site region 90886
Tssr86494 9 92249656 to 92249667 11 + TSS region transcription start site region 86494
Tssr86495 9 92249678 to 92249689 11 + TSS region transcription start site region 86495
Tssr86496 9 92249715 to 92249729 14 + TSS region transcription start site region 86496
Tssr86497 9 92249749 to 92249753 4 + TSS region transcription start site region 86497
Tssr86498 9 92250026 to 92250034 8 + TSS region transcription start site region 86498
Tssr86499 9 92250039 to 92250060 21 + TSS region transcription start site region 86499
Tssr86500 9 92250061 to 92250068 7 + TSS region transcription start site region 86500
Tssr86501 9 92250083 to 92250098 15 + TSS region transcription start site region 86501
Tssr86502 9 92250124 to 92250127 3 + TSS region transcription start site region 86502
Tssr86503 9 92250165 to 92250187 22 + TSS region transcription start site region 86503
Plscr1 9 92250194 to 92272561 22367 + protein coding gene phospholipid scramblase 1
Tssr86504 9 92250195 to 92250274 79 + TSS region transcription start site region 86504
Cpgi22145 9 92250211 to 92250756 545 CpG island CpG island 22145
Tssr86505 9 92250296 to 92250311 15 + TSS region transcription start site region 86505
Tssr90887 9 92250472 to 92250486 14 - TSS region transcription start site region 90887
Tssr90888 9 92250510 to 92250528 18 - TSS region transcription start site region 90888