Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:90201793-91321915

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbc1d2b 9 90202047 to 90270769 68722 - protein coding gene TBC1 domain family, member 2B
Tssr90850 9 90202685 to 90202733 48 - TSS region transcription start site region 90850
Gm16200 9 90221295 to 90221625 330 - pseudogene predicted gene 16200
Tssr90851 9 90237616 to 90237617 1 - TSS region transcription start site region 90851
Tssr90852 9 90237999 to 90238022 23 - TSS region transcription start site region 90852
Tssr2969 9 90242996 to 90243001 5 - TSS region transcription start site region 2969
Tssr90853 9 90243019 to 90243033 14 - TSS region transcription start site region 90853
Tssr90854 9 90243113 to 90243120 7 - TSS region transcription start site region 90854
Tssr90855 9 90243121 to 90243133 12 - TSS region transcription start site region 90855
Tssr2970 9 90243139 to 90243147 8 - TSS region transcription start site region 2970
Tssr86467 9 90243301 to 90243312 11 + TSS region transcription start site region 86467
Tssr2971 9 90245301 to 90245350 49 - TSS region transcription start site region 2971
Tssr86468 9 90245426 to 90245435 9 + TSS region transcription start site region 86468
Tssr86469 9 90245441 to 90245453 12 + TSS region transcription start site region 86469
Tssr86470 9 90245465 to 90245475 10 + TSS region transcription start site region 86470
Tssr86471 9 90245487 to 90245502 15 + TSS region transcription start site region 86471
Tssr90856 9 90250529 to 90250563 34 - TSS region transcription start site region 90856
Tssr90857 9 90255932 to 90255943 11 - TSS region transcription start site region 90857
Cpgi22134 9 90270067 to 90270978 911 CpG island CpG island 22134
Tssr90858 9 90270712 to 90270799 87 - TSS region transcription start site region 90858
Gm30849 9 90315448 to 90317639 2191 + lincRNA gene predicted gene, 30849
Tssr86472 9 90315909 to 90315925 16 + TSS region transcription start site region 86472
Gm22717 9 90315910 to 90316080 170 + snRNA gene predicted gene, 22717
Tssr86473 9 90351992 to 90351998 6 + TSS region transcription start site region 86473
Gm22866 9 90351995 to 90352171 176 + snRNA gene predicted gene, 22866
Gm39398 9 90458976 to 90482876 23900 + lncRNA gene predicted gene, 39398
Gm30905 9 90687386 to 90704932 17546 - lncRNA gene predicted gene, 30905
Gm2497 9 90732924 to 90733524 600 - pseudogene predicted gene 2497
Gm29605 9 90734145 to 90734436 291 - pseudogene predicted gene 29605
Gm29604 9 90747380 to 90747542 162 - pseudogene predicted gene 29604
D9Mit308 9 90761793 to 90761915 122 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 308
D9Dcr25 9 90761796 to 90761902 106 DNA segment DNA segment, Chr 9, Derry C. Roopenian 25
Gm28703 9 90825302 to 90828860 3558 - lincRNA gene predicted gene 28703
Tssr90859 9 90828847 to 90828861 14 - TSS region transcription start site region 90859
Gm37665 9 90863159 to 90863307 148 + unclassified gene predicted gene, 37665
Gm31114 9 90907005 to 90933945 26940 - lncRNA gene predicted gene, 31114
Gm20561 9 90907906 to 90908197 291 - pseudogene predicted gene, 20561
Gm29408 9 90938980 to 90939195 215 + lincRNA gene predicted gene 29408
Tssr90860 9 91051104 to 91051106 2 - TSS region transcription start site region 90860
Tssr90861 9 91085825 to 91085865 40 - TSS region transcription start site region 90861
Tssr86474 9 91097042 to 91097043 1 + TSS region transcription start site region 86474
Gm5620 9 91097149 to 91098496 1347 + pseudogene predicted gene 5620
Tssr90862 9 91102174 to 91102184 10 - TSS region transcription start site region 90862
Gm36960 9 91128484 to 91130518 2034 - unclassified gene predicted gene, 36960
Tssr90863 9 91130388 to 91130399 11 - TSS region transcription start site region 90863
Tssr90864 9 91130477 to 91130488 11 - TSS region transcription start site region 90864
Gm29602 9 91216015 to 91216456 441 + pseudogene predicted gene 29602
Gm37812 9 91270930 to 91273404 2474 - unclassified gene predicted gene, 37812
D9Mit198 9 91281970 to 91282118 148 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 198
Gm18378 9 91290996 to 91291617 621 + pseudogene predicted gene, 18378
Gm40546 9 91316202 to 91354063 37861 - lncRNA gene predicted gene, 40546