Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:88952047-89182051

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcl2a1a 9 88956920 to 88962416 5496 + protein coding gene B cell leukemia/lymphoma 2 related protein A1a
Tssr86418 9 88956979 to 88957003 24 + TSS region transcription start site region 86418
Tssr86419 9 88957011 to 88957022 11 + TSS region transcription start site region 86419
Tssr86420 9 88957024 to 88957036 12 + TSS region transcription start site region 86420
Tssr90835 9 88959103 to 88959110 7 - TSS region transcription start site region 90835
Gm37833 9 88980921 to 88984176 3255 + unclassified gene predicted gene, 37833
Gm37993 9 88985191 to 88986178 987 + unclassified gene predicted gene, 37993
Cpgi22121 9 89066637 to 89066810 173 CpG island CpG island 22121
Tssr86421 9 89066970 to 89066976 6 + TSS region transcription start site region 86421
Tssr86422 9 89067047 to 89067051 4 + TSS region transcription start site region 86422
Gm24463 9 89075336 to 89075407 71 + snoRNA gene predicted gene, 24463
Gm19498 9 89076012 to 89076342 330 - pseudogene predicted gene, 19498
Trim43b 9 89084624 to 89092835 8211 - protein coding gene tripartite motif-containing 43B
Gm40542 9 89087641 to 89088408 767 + lncRNA gene predicted gene, 40542
Tssr90836 9 89092682 to 89092691 9 - TSS region transcription start site region 90836
4930579C12Rik 9 89113111 to 89177887 64776 - lincRNA gene RIKEN cDNA 4930579C12 gene
Gm26423 9 89158999 to 89159126 127 + snoRNA gene predicted gene, 26423
Tssr90837 9 89177883 to 89177888 5 - TSS region transcription start site region 90837
Gm40544 9 89178012 to 89179160 1148 + lncRNA gene predicted gene, 40544