MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:88860191-89111178

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26611	9	88859011 to 88883554	24543	+	lincRNA gene	predicted gene, 26611
Gm2396	9	88878994 to 88937342	58348	-	unclassified non-coding RNA gene	predicted gene 2396
Gm23707	9	88917832 to 88917956	124	+	snoRNA gene	predicted gene, 23707
Bcl2a1a	9	88956920 to 88962416	5496	+	protein coding gene	B cell leukemia/lymphoma 2 related protein A1a
Tssr86418	9	88956979 to 88957003	24	+	TSS region	transcription start site region 86418
Tssr86419	9	88957011 to 88957022	11	+	TSS region	transcription start site region 86419
Tssr86420	9	88957024 to 88957036	12	+	TSS region	transcription start site region 86420
Tssr90835	9	88959103 to 88959110	7	-	TSS region	transcription start site region 90835
Gm37833	9	88980921 to 88984176	3255	+	unclassified gene	predicted gene, 37833
Gm37993	9	88985191 to 88986178	987	+	unclassified gene	predicted gene, 37993
Cpgi22121	9	89066637 to 89066810	173		CpG island	CpG island 22121
Tssr86421	9	89066970 to 89066976	6	+	TSS region	transcription start site region 86421
Tssr86422	9	89067047 to 89067051	4	+	TSS region	transcription start site region 86422
Gm24463	9	89075336 to 89075407	71	+	snoRNA gene	predicted gene, 24463
Gm19498	9	89076012 to 89076342	330	-	pseudogene	predicted gene, 19498
Trim43b	9	89084624 to 89092835	8211	-	protein coding gene	tripartite motif-containing 43B
Gm40542	9	89087641 to 89088408	767	+	lncRNA gene	predicted gene, 40542
Tssr90836	9	89092682 to 89092691	9	-	TSS region	transcription start site region 90836